KEGG   Variovorax paradoxus EPS: Varpa_5616
Entry
Varpa_5616        CDS       T01392                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00061  Fatty acid biosynthesis
vpe00071  Fatty acid degradation
vpe01100  Metabolic pathways
vpe01212  Fatty acid metabolism
vpe02024  Quorum sensing
Module
vpe_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Varpa_5616
   00071 Fatty acid degradation
    Varpa_5616
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_5616
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vpe01004]
    Varpa_5616
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vpe04147]
    Varpa_5616
Enzymes [BR:vpe01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Varpa_5616
Lipid biosynthesis proteins [BR:vpe01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Varpa_5616
Exosome [BR:vpe04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Varpa_5616
  Exosomal proteins of breast cancer cells
   Varpa_5616
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: ADU39770
UniProt: E6VBH0
Position
complement(6101141..6103021)
AA seq 626 aa
MSTLALRAPAGLWDLAHLQPRLDVVVPGDTVPAVFWKAVELRGDKVWMRQKEFGIWRTWT
WRQTAEAVREIAGGLLALGFGHGECASILSNTVIEWVLCDVAVLSCGGVSNGIYPTDAAS
QVHYLCEDSRTTVLFVEDDEQLDKALEVRAQLPLLRKIIVLDMEGLRDLDDPGVISLDAL
RALGREHLKANPQALEQRIAACRAEDLAILVYTSGTTGKPKGAMHSHRGLVYTMRGYNTL
LAQGETDERMCFLPLCHIAERMGGEYFAMYTGSILNFVENPETVPENVREISPTVFTAVP
RVWEKFYSGVMIALKEASRLQQAAYGWSIGVGQQIADRVLQGKPIGAGLRFKFRIARWLA
LNNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPMLEVWGMTESCGASTGVPPSRIA
PGSIGPATSYNEVRLDPETGEILVRGPNVFMGYLNLPEKTAETIDADGWLHTGDVGLVDA
EGYFRITDRMKDIIITAGGKNITPSELENELKFSPYVTDAVVIGDKKPYLTVIVMIDQEN
VEKFAQDNDVPFSNYESLTRAQEVLDLIQGEIDRVNAKFARVEQIKKFFLLETQLSAEDE
ELTPTMKLKRKLVQTKYADRIEAMYR
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgagcacactggccctgcgcgctcctgccggtctctgggacctggcgcatcttcagccc
cggctcgatgtcgtcgtgcctggtgacaccgttcccgctgtgttctggaaggccgtcgaa
ctgcgcggcgacaaggtctggatgcgtcagaaggaattcggcatctggcgcacctggacc
tggcggcagaccgccgaggccgtgcgcgagatcgcgggaggcctgctggcgctggggttc
gggcatggcgagtgcgcgtcgatcctctccaacaccgtcatcgagtgggtgctgtgcgat
gtggccgtgctcagttgcggcggcgtgtcgaacggcatctacccgaccgatgcggcttcg
caagttcactatctctgcgaagactcgcgcaccaccgtgctcttcgtggaagacgatgag
cagctggacaaggcgctcgaagtgcgcgcgcagttgccgctgctgcgcaagatcatcgtg
ctcgacatggaaggcctgcgcgacctcgacgatcccggcgtcatcagcctcgacgcgctg
cgcgcccttggccgcgagcacctgaaggcgaacccgcaagcgttggaacagcgcatcgcc
gcctgccgcgcggaagacctcgcgatcctcgtctacacctccggcaccaccggcaagccc
aagggcgcgatgcacagccaccgcgggctggtctacaccatgcgcggctacaacacgctg
ctcgcgcagggcgagacggacgagcgcatgtgcttcctgccgctgtgccacatcgccgag
cgcatgggcggcgaatacttcgcgatgtacaccggctcgatcctcaacttcgtcgagaac
cccgagacagtgcccgagaacgtgcgcgagatttcgcccacggtgttcacggccgtgccg
cgcgtgtgggagaagttctattcgggcgtgatgatcgcgctgaaggaggcgagccgcctg
cagcaggctgcctacggatggagcatcggcgtgggtcagcagatcgccgaccgcgtgctg
cagggcaagccgatcggcgcggggctgcgcttcaagttccgcatcgcgcgctggcttgcg
ctcaacaacgtgcgcaagctcatcggcatccatcgcgcgcggttcctcgtgaccggcgcg
gcgccgatttctcccgacctcgtgcgctggtacctcgcgctcggcgtgccgatgctggag
gtgtggggcatgaccgagtcgtgcggcgcctccaccggcgtgccgccgtcgcgcatcgcc
ccgggctcgatcggcccggccaccagctacaacgaggtgcggctcgatcccgaaaccggc
gagatcctggtgcgcggccccaatgtcttcatgggttacctcaacctgccggagaagacg
gccgagaccatcgacgccgacggctggctgcacacgggcgacgtcgggctggtcgacgcg
gaagggtatttccgcatcaccgaccgcatgaaggacatcatcatcacggcaggtggaaag
aacatcacgccgagcgagctggagaacgaactcaagttcagcccctacgtcaccgacgcg
gtggtgatcggcgacaagaaaccctacctgacggtgatcgtgatgatcgatcaggagaac
gtcgagaagtttgcgcaggacaacgacgtgccgttcagcaactacgagagcctgacgcgc
gcgcaggaggtgctggacctgatccagggcgagatcgaccgcgtcaacgcgaagttcgcg
cgcgtggagcagatcaagaagttcttcctgctcgagacgcagctgagcgccgaggacgag
gagctcacgccgacgatgaagctcaagcgcaagctggtgcagacgaagtacgcagaccgc
atcgaagcgatgtaccgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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