KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_02195
Entry
M634_02195        CDS       T02761                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpf03400]
    M634_02195
Enzymes [BR:vpf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M634_02195
DNA repair and recombination proteins [BR:vpf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M634_02195
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII
Other DBs
NCBI-ProteinID: AGQ89771
Position
I:437403..439418
AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVGQTLGKAESKGLMVSTFHTLGLNIIKREYKQLGLKAGFSLFDDQDQMALLKEL
TEKQLDGDKDLLKQLLSTISNWKNDMLTPEQAKAMAKGEQQQLFAFCFEMYQKQMKAYNA
LDFDDLILLPVLLLRNNEDVRQRWQNRIRYLLVDEYQDTNTSQYELVKLIVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLAKNEEHEAERVTGELIAHKFLNRTEYRDYAILYRGNHQSRLIEK
SLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEK
LGSYANMRGKSLFEASFEMGLEQHLTGRGLENLRRFTQWLVAIADQAERGNTVEAVRSLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRD
MMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEVNKKPVSQEERMAKGQA
HIANLRSMFKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaagctgaaccctagacaagatgaagccgtaaaatacgtgtctggtccatgcctagtg
cttgccggcgcaggctcaggtaaaacgcgcgtaattactaataaaattgcttacttggtt
cagcaatgtggctacaaagcaagaaacatcgcggccgtgacctttaccaacaaagccgcg
cgcgaaatgaaagagcgtgttggtcaaaccttgggtaaagccgagtcgaaaggtttgatg
gtttctactttccataccttgggtttgaatatcatcaaacgtgagtacaagcagcttggg
ttaaaagcgggcttttcgttgtttgatgatcaagaccagatggcgctgttgaaagagttg
acggaaaagcaactcgacggtgataaagacctactcaaacaactattgagtacgatctcc
aactggaaaaacgacatgttaacgccagagcaagccaaagcgatggcgaaaggcgagcaa
caacagctgttcgctttttgttttgagatgtaccagaagcagatgaaggcgtacaacgcg
ctcgattttgacgacctgatcttgctgccggtattgctgctgcgtaataatgaagacgtg
cgtcagcgttggcaaaatcgcatccgctatctattggttgatgaataccaagataccaac
accagtcagtatgaactggtcaaattgattgtgggtgagcgcggtcgcttgaccgtcgtg
ggtgatgatgaccaatcgatttattcgtggcgtggtgccaaaccgcaaaacttggtgctg
ctcgggcaagattacccgaatctgcgtctgatcaagctggagcaaaactatcgctcgacc
agtcgaattcttcgtgctgcaaacattttgattgccaataacccgcacgtgtatgaaaaa
tcactgttctcagaaattcctgacggcgaaaaactgaaagtgttgctagccaagaacgaa
gagcacgaagcagaaagggtcacgggtgagttgattgcgcacaagttcttaaatcgcacg
gaatatcgagattatgcgattttgtatcgtggtaaccatcaatcgcgtttgattgaaaaa
tcactgatgcaaaaccgcgtaccctacaaactgtctggcggtacgtcgtttttcgcgcgt
gccgaaatcaaagacatcatggcgtatcttcgagtgttggtgaaccctgacgatgacaac
gcatttctgcgcattgtgaacacgccgcgacgcgaaattggcccggtaacgttagaaaaa
ctgggcagttacgccaatatgcgcggcaaaagcctatttgaagcaagctttgaaatggga
ttagagcaacacctcacggggcgtggtctcgaaaatctgcgtcgctttacacaatggttg
gttgcgattgccgatcaagctgagcgaggtaacacagtagaagccgttcgttccttggtt
cgtgacattcattacgaagattggctgtacgaaacctcagccagcccgaaagccgctgaa
atgcgcatgaagaacgtttcggatctctactcttggattgtggctgacttagaaggtgac
aattacgaccaagaagagaaaacgctgaaagaagtggttcaacgtttgaccttgcgtgac
atgatggaacgcggcgaagaagacgaagacagcgatgccgttcaattgatgacactacac
gcatcaaaaggtctcgagtttccttacgtgtatttgattggttcggaagaaggcatattg
ccgcatcaaaccagtattgatgaagataacgtcgaagaagagcgacgcttgatgtacgta
ggcatcacccgtgcacagcgagagctgacgtttaccatgtgtaaagagcgtcgccagttt
ggtgagttgatcaagccgactcaaagtcgttttttggatgagctgccgtttgatgatgtc
gaatgggaagtgaacaaaaagcctgtgtctcaagaagaacgaatggcaaaaggtcaggcg
cacattgcaaacctgcgctcgatgtttaagaagtga

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