KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_21975
Entry
M634_21975        CDS       T02761                                 
Name
(GenBank) glycine dehydrogenase
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00260  Glycine, serine and threonine metabolism
vpf00630  Glyoxylate and dicarboxylate metabolism
vpf00785  Lipoic acid metabolism
vpf01100  Metabolic pathways
vpf01110  Biosynthesis of secondary metabolites
vpf01200  Carbon metabolism
Module
vpf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    M634_21975
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    M634_21975
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    M634_21975
Enzymes [BR:vpf01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     M634_21975
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase Aminotran_5 RNase_H2-Ydr279
Other DBs
NCBI-ProteinID: AGQ93436
Position
II:complement(1263447..1266311)
AA seq 954 aa
MTELLQSLSTQNEFVGRHNGPKLSDQQKMLEAINAVSLDALISETVPANIRLEQPMTLAE
AKSEADMLAAMKQFAKQNQVKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLESLLNFQQMVIDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTIEVVKTRAKFIGFEVLVGSLESLPEQDVFGALVQYPSTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVAIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDAKGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGLRTIAR
RTHHMTAILAAGLTKGGFELAHNSFFDTITINTGEKTLDLYTKALAADINLRALPGKLGI
SLDETTTVTDVEALFAVFGVKEDVTALSTEIAGNEFAAIPEALRRTSEYLTHPVFNTYHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSIHPFAPAEQAAG
YAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDDEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKV
KEVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVEGEDFAVSAADFGSASILPISWAYIAMMGEAGLSNATKVAIL
NANYVMERLRPHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLAELNRFCDAMISIREEMTKVKNGEWPLENNPLVNAPHTQVDL
SAEEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgactgaattacttcaaagcctcagcacacaaaacgagttcgttggacgccacaacgga
ccaaaactttctgaccaacaaaaaatgttggaagcgatcaacgcagttagcctagacgca
ctgatcagcgaaaccgtaccagcaaacatccgccttgagcagccaatgacgttggcagaa
gcgaaaagcgaagcggacatgttggctgcgatgaaacaattcgcaaaacaaaaccaagtc
aaacgtacattcatcggtcagggttactacaacacgttcacgccaaatgtcattctgcgt
aacgtactagaaaacccaggctggtacaccgcgtacacaccataccaaccagaaatttct
caaggccgtctggaatcactactgaacttccaacaaatggttatcgacctaaccggtatg
gaaatcgcaaacgcgtctttgcttgatgaagcaacggcagcggcagaagcaatgacactt
tgtaagcgcgctggtaagagtaagagcaacgtattctttgtggctgacgacgtgcatcca
caaaccatcgaagtggtaaaaacgcgtgctaaattcatcggttttgaagtgctagttggc
tctttagaatctctaccagagcaagacgtattcggcgcgctggttcaatacccaagcaca
acgggtgaagttcgtgatctaacggacatcatcgcgaaagcacaagcaaacaaaacgctt
gttactgttgcgactgacctacttgcttctaccctattgaaacctgctggagaaatgggc
gcagacgtcgcaatcggttcagctcagcgtttcggcgtaccaatgggttacggcggtcca
cacgcggcatttatggcaactcgtgacaaacataaacgtacaatgccaggccgtgttatc
ggtgtttctatcgatgcaaaaggcaaccaagcacttcgtatggcaatgcagactcgcgag
cagcacatccgccgcgaaaaagcgacatcaaacatctgtaccgctcaagcgttactagca
aacatggcatctttctacgcggtttaccacggtgcagaaggtctacgcaccattgctcgt
cgcacacaccacatgactgccatccttgctgctggcctaacaaaaggcggctttgaactg
gctcataacagcttcttcgacaccatcaccatcaacactggtgagaaaacgctagatctg
tacacaaaagcactcgcagcagacatcaacctacgcgccctacctggcaaactaggcatt
agcttagacgaaacaacaaccgttacagacgtcgaagcattgttcgctgtctttggcgta
aaagaagacgttaccgcactatctacggaaatcgctggtaacgagtttgccgccattcca
gaagcgctacgtcgtacttcagaatacctaacgcacccagtgttcaacacttaccacagt
gaaacacaaatgatgcgttacctaaaacagcttgaaaacaaagacttctcgctaacgcac
ggtatgatcccactaggcagctgtacgatgaagctaaacgcagcggcagagatgatccca
atcacttggcctgagtttggttctatccacccattcgcacccgcagaacaagcggcgggc
tatgcagcgctagcgaaagatctaaaagagaagctttgtgaaatcactggctacgacgca
ttctcactacagccaaactctggcgcatcgggcgagtatgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccaagctctgcg
cacggtactaaccctgcaaccgcatctatggtgtcaatgaaagttgtggttgttaagtgt
gatgacgaaggcaacatcgacatcgacgacctagcagcgaaaatcgagaagcacaaagac
aacctatcaagcatcatgatcacttacccttctacgcacggcgtttacgaagagaaagtg
aaagaagtgtgtgaaatggttcatgccgcaggcggtcaagtatacctagacggcgcgaac
atgaacgcacaggttggcctaacgtcccctggctttatcggctcagacgtttctcaccta
aacctacacaaaaccttctgtatccctcacggtggcggcggtccaggtatgggccctata
ggtgttaaatcccacctagcacctttcctaccaggtcacatcgagaacggtgtagaaggc
gaagacttcgcagtatcagctgcagattttggtagtgcatctatcctacctatctcttgg
gcttacatcgcaatgatgggtgaagcaggcttatccaacgcaaccaaggtcgcgattcta
aacgctaactatgtgatggaacgtctacgccctcactaccctgttctttaccgtggtaaa
aatggccgcgtagcgcacgaatgtattatcgacatccgtccgctgaaagaagaaacaggc
attagcgaagaagatatcgctaagcgtctgatggactacggtttccacgcgccaaccatg
tcgttcccagttgctggcacgctaatggttgaaccaacggaatcggaagacctagcagag
ctaaatcgcttctgtgatgcgatgatttctattcgtgaagaaatgacgaaagtgaaaaac
ggcgaatggccactagagaacaaccctctcgttaatgcgccacacacgcaagttgacctt
tctgctgaagaatgggatcgcccatactcacgcgaacttggctgcttcccttctaaagca
actaaatcttggaaatactggcctacagtaaaccgcgtagataacgtatacggcgaccgt
aacctcatctgctcgtgcccaagtatcgataactacgaagattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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