KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_0573
Entry
VPUCM_0573        CDS       T03116                                 
Name
(GenBank) S-adenosylmethionine:tRNA ribosyltransferase-isomerase
  KO
K07568  S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vph03016]
    VPUCM_0573
Enzymes [BR:vph01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.17  S-adenosylmethionine:tRNA ribosyltransferase-isomerase
     VPUCM_0573
Transfer RNA biogenesis [BR:vph03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    VPUCM_0573
SSDB
Motif
Pfam: Queuosine_synth DUF5427
Other DBs
NCBI-ProteinID: AHI98531
Position
1:629067..630119
AA seq 350 aa
MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTGELIDGTFTDVLNQVQAGDLVVFNN
TRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGENDEYSAEMV
ARHDALFELKFNSDKTVLEILEEIGHMPLPPYIDRPDEDADKERYQTVYNQKPGAVAAPT
AGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHMHAEYVEVPQEVVDAI
NATKARGGRIIAVGTTSVRSLESAAQDALKKGSELVPFFGDTEIFIYPGYEYQLVDCLIT
NFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFIKKKTI
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaagtatcagatttccatttcgaccttccagatgaactcatcgctcgttaccctcaa
ccagagcgtaccgcaagccgactgctacaaatggacggcaatactggcgagcttatagat
ggcacatttaccgatgtgttaaaccaagttcaagctggtgacttagtggttttcaataat
acccgcgttattccagcgcgtatgtttggtcgtaaagaatctggcggtaagttagaggtg
ctagtggagcgcatgctagatgagaaaagcattcttgcgcacgttcgctgctctaaatca
ccaaaaccaggcactactattattgtgggcgagaatgacgaatactcagcggaaatggtg
gctcgccacgacgccctattcgaactgaaatttaactctgataagacggtattagaaatc
cttgaagaaattggccacatgccacttcctccatacattgaccgcccagatgaagacgca
gataaagagcgttaccaaaccgtatataaccaaaaaccaggcgcagtagcagcacctacg
gctggcctgcactttgatgacgttcttttagataagatcaaagccaaaggcgctgagttt
gcttacgttacactacacgtcggtgcaggtacgttccaaccagtaaaagtggataatatc
aacgatcaccacatgcatgcagagtatgtagaagtaccgcaagaagtggtggatgccatc
aatgcaaccaaagctcgcggtggtcgcatcatcgcagtgggtacaacatcagtacgttca
ctcgaaagtgcagcgcaagatgcgttgaagaaaggctcagaattggttccattcttcggc
gatactgaaatttttatctaccctggttacgaataccagctggtggattgcttgatcacg
aacttccacttaccagaatcaacattgatcatgttggtgagtgcgtttgctggctacgag
aacaccatgaatgcttacaagcatgcggtggaaaacaaataccgcttcttctcgtacggt
gattcaatgttcatcaaaaagaaaacgatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system