KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_2132
Entry
VPUCM_2132        CDS       T03116                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vph03009]
    VPUCM_2132
Enzymes [BR:vph01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     VPUCM_2132
Ribosome biogenesis [BR:vph03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VPUCM_2132
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF3603 Cupin_2 Cupin_3 Orexin
Other DBs
NCBI-ProteinID: AHJ00091
Position
1:complement(2298360..2299307)
AA seq 315 aa
MSEIRTQVQFVDIDEDMAGQRIDNFLRNQLKDIPKSMIYRIVRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTVEKKEEDVAPSTKLNKVAELEHMIIYEDDHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVKKFYFAL
VMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKILEKFEQATLIQASPITGRTH
QIRVHTQYSGHPIAWDDRYGDRRFDAYTGQLGLDRLFLHAANIKFQHPSNDEWMEINAPM
ESKLEKVLVGLRKAN
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagcgagataagaacacaagtccagttcgttgatatcgacgaagacatggcgggtcaa
cgcattgataacttcttgcgtaaccaattaaaagacattccaaagagcatgatttatcga
atcgtgcgtaagggtgaagtgcgcgtgaacaaaaagcgcatcaaagccgaatataaacta
aaagctggcgacctagtccgaattccacctgtaacggttgagaaaaaggaagaggatgtc
gcaccaagcacgaaacttaataaggttgctgaactagaacatatgatcatttatgaagat
gatcatatgctgattctgaacaaaccgtctggtacagcagtgcatggtggtagtggcttg
aagtttggtgcaattgaagcattaagggcattgcgtccacaagcacgcttcctcgaattg
gttcaccgtattgacagagatacctcaggtattttactggttgctaaaaagcgctcggcg
cttcgccatttgcaagcgcagttccgtgagaaaacggtgaagaagttttacttcgcctta
gtgatggggcaatggaaaagcagctgtaaagttgtgaacgcacctctacttaaaaatgaa
gtgaacagtattgtacgagtgaacccaaacggtaagccatcggaaacgcgtttcaaaatt
cttgagaaatttgagcaagcgacgttgattcaagccagcccaattacggggcgtactcac
caaattcgagtgcatactcagtactccggacatcctatcgcatgggatgaccgttacgga
gatagacgttttgatgcctacactggtcaacttggattggaccgtttgtttttgcatgcc
gcgaacattaagtttcaacatccgtctaatgatgaatggatggaaattaatgctccgatg
gaatccaaactagagaaagtgcttgttggattaagaaaggcaaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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