KEGG   Vanderwaltozyma polyspora: Kpol_186p3
Entry
Kpol_186p3        CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03020  RNA polymerase
vpo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Kpol_186p3
  09124 Replication and repair
   03420 Nucleotide excision repair
    Kpol_186p3
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpo03021]
    Kpol_186p3
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_186p3
   03400 DNA repair and recombination proteins [BR:vpo03400]
    Kpol_186p3
Transcription machinery [BR:vpo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Kpol_186p3
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Kpol_186p3
DNA repair and recombination proteins [BR:vpo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Kpol_186p3
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25 MSSS
Other DBs
NCBI-GeneID: 5542361
NCBI-ProteinID: XP_001642239
UniProt: A7TTM8
AA seq 171 aa
MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLQEVEGSCTGKFGYILCVLDYDKIEIERGR
ILPTDGSAEFTVKYRAIVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLI
FNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHAIGSIKEDYLGAI
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtttttcattaaggacctttcgctgaatatcactttacatccatcattctttggacct
cgtatgaaacagtacttaaagactaagttactgcaagaggtagaaggttcatgtactggt
aaatttggttatatattatgtgttttggattatgataaaattgaaattgagcgtggtaga
attttaccaacagatggttctgcagaattcacagtaaaatacagagcaattgtgtttaag
ccattcaaaggtgaagtagtagatggtactgtggtatcatgttcccaacatggttttgaa
gttcaagtaggacctatgaaagtttttgttactaagcatttgatgccacaagaccttata
ttcaatgcaggttcgaatcctccatcatatcaaagttcagaagatgttataactatcaaa
agtagaatccgtgttaagatagaaggttgtattagtcaagttagttctatccatgcgatt
ggtagtattaaggaagattacttgggtgctatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system