KEGG T01130: Vpar

Veillonella parvula: Vpar_0792

Entry

Vpar_0792 CDS T01130

Definition

RecD/TraA family helicase

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

vpr Veillonella parvula

Pathway

vpr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:vpr03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 HHH_4 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD PhoH PIF1 AAA_12 HHH_5 UvrD_C AAA_17 DUF2075 UvrD-helicase AAA_22 AAA_18 AAA AAA_28 AAA_16 AAA_23 AAA_29 T2SE AAA_15 Miro TrwB_AAD_bind DUF853 AAA_10 SMC_N AAA_25 NTPase_1 RPA_C FtsK_SpoIIIE

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

932649..934802

AA seq 717 aa
MDAIRGFVYRTIYENTQRTYCVFILKDYNEEYITCTGKFESPKEGEDIEVRGRYVEHEKY
GRQFDASSVEKLKPDNMGAAKTYLLNLGIKGFGEKSVEKVLEYFGIRILEILREERPEEI
KDVPGLRKSVKDELFNTLLGEGILSDLNHFFESHHISSKWSRIVYTYYGVQSVAVIEDNP
YTLLRVAPDMLFGTADTLAEHLGINGSDTRRLEAGLEWILRSLDNQGHTCLPVDQLIGRL
DDLLQTDVDDIANFIESLLEQGALYSTYYEDILYIYPPEMYVSEVEGVHYTREFLLQADP
IALDISSFIEKFERDNYITFGDAQKEAIQLSFFEKFSLITGGPGTGKTTIIKALVKGFQL
GGLGRIILCAPTGRAAKRLTEATEFEATTIHRLLVPVQGSDSYDFTKNEDDPLDIDVIII
DEASMLNVRLFYSLMAAIPKEAHVIIVGDVDQLPPIGAGFVLKDLLDSDCVPYTRLNQIY
RQSSGNTIVESAYAINRGEMPNLEGVSEEFSFIPVKSYDMMMKAIIDVYKREQETIEDEL
DIQIISPMRRGEAGSTLISQYVQQAVNPPDSYKGEVRVNGITYRVGDKVIQILNDYELEV
FNGEIGVIYAITRTDICIRFIHKEVRLPIDEAHMIMPAYAITVHKSQGSEYGVVIIPFVP
RYGGMLQRNLLYTAVTRAKRKVIIVGTTSAVERAVRTVNADERYTLFKERLQGRCDS

NT seq 2154 nt +upstreamnt +downstreamnt
atggacgccatacgaggatttgtataccgaactatatatgagaatacacaacgtacatat
tgcgtgtttatcctaaaagattataatgaggaatacattacttgtactggcaaatttgag
tctcctaaagaaggggaagacatcgaagtacggggccgctatgtagaacatgaaaagtac
ggccgccaatttgatgcgagcagtgttgaaaagttaaaacctgataatatgggtgctgcc
aagacttatttgttgaatctaggaataaaaggttttggtgaaaaatccgtagagaaggta
ctagagtatttcggtattcgtattttagaaattttacgggaagaacgtccagaagagatt
aaggatgttccaggtctccgaaagagtgttaaggatgaattatttaataccttacttggt
gaaggtattttatccgatttaaatcatttttttgaaagtcatcacatttcatcgaaatgg
agtcgcattgtatatacctattatggtgtgcagtcagttgcagttatagaggataatcct
tatacattattacgtgtagcaccggatatgctctttggtacggccgatacactagcagag
catcttggtattaatggtagtgatacacgccgtttagaggctggtttagaatggattcta
cgtagtttagataatcaaggtcatacatgtttaccagtagaccaacttatcggtcgactt
gacgatttattacaaactgatgtagatgatattgcgaactttattgaaagtttgctggaa
caaggtgcactgtatagtacgtattatgaagacatcttatatatctatccgccagagatg
tatgtttctgaagtggaaggggtccactatactcgtgagtttctattacaagctgatcca
atagcattagatatttctagttttattgaaaagtttgaacgagacaactacattactttt
ggtgatgctcaaaaagaagctatacagctctcattttttgaaaagttttctcttataact
ggtggtcctggtacaggtaaaacaactatcatcaaggcgctagtaaaaggtttccaactc
ggtggattggggcgcattatactttgtgctcctacgggacgtgctgcaaagcgtctgacc
gaggccactgagtttgaagctactacaattcatcgtctattggtacctgttcaaggtagt
gactcctatgactttacaaagaatgaagatgatcctctagatatagatgtcattatcatc
gatgaagcatctatgcttaatgtgcgtttattctattctttgatggctgctattccaaag
gaagcccatgtcattattgtgggtgacgtagatcaattaccacctataggtgctgggttc
gtattaaaagatttattagatagtgattgtgtgccctatacacgacttaatcagatttat
cgtcaaagctctggtaatactatcgttgaaagtgcttacgcaattaaccgtggtgaaatg
cctaacctggaaggtgtgagcgaagagttttcttttattcctgttaaatcttatgatatg
atgatgaaagccatcattgatgtatataaacgtgaacaagagacgatagaggatgaatta
gatattcaaattatttctcctatgcgccgtggtgaagcaggtagtacattgatatcacaa
tatgtacaacaagccgtaaaccctccagacagctataagggagaagttcgtgtcaatggc
attacgtatcgcgttggggataaggttattcaaattctcaatgattatgagttagaagtg
tttaatggcgaaattggcgttatctatgctattacgcggaccgatatttgtattcgattt
atccataaagaggttcgtctacctatcgatgaagcacatatgattatgcctgcttatgct
attacagttcataagagtcaaggtagtgagtatggtgtagttattattccatttgttcca
cgttatggtggcatgttacaacgtaatttgttgtatactgctgttacacgggcaaagcgt
aaagtaatcatcgttggtactacgagcgcagttgaacgtgctgtgcgtactgttaatgcc
gatgaacgttacacattgtttaaagaacgactacaagggagatgtgattcgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-VPR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (33)   
   Pfam (33)   
All databases (43)   

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