KEGG   Vibrio qinghaiensis: CCZ37_04225
Entry
CCZ37_04225       CDS       T05259                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
vqi  Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:vqi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vqi03016]
    CCZ37_04225
Enzymes [BR:vqi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CCZ37_04225
Transfer RNA biogenesis [BR:vqi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CCZ37_04225
 Prokaryotic type
    CCZ37_04225
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ASU23530
UniProt: A0A223N1F0
Position
1:888801..889595
AA seq 264 aa
MRIALGIEYNGSQYYGWQRQRDVKSVQEELEKALTVVANHPVEVLCAGRTDAGVHGTGQV
IHFDTTACRKMVAWTMGVNAHLPKDIAVRWATEVSSDFHARFSATARRYRYIIYNHAYRP
GILSSGVSHYHGDLDVEKMQQAGQLLLGENDFTSFRAVHCQSNSPWRNVMHLNVTRHGHY
VVIDIKANAFVHHMVRNITGSLIVVGRGEQPPEWIKWLLEAKDRKLAGATAKAEGLYLVA
VDYPEEFSLPKESLGPLFLADHLS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgagaatcgctttaggtattgagtacaatggttctcaatactatggttggcagcgacaa
cgtgacgttaaaagtgtccaagaagaattagaaaaagcactcacagttgtggcgaaccat
ccggttgaagtattgtgtgcggggcgcaccgatgcaggggttcacggcacagggcaggtg
atacattttgatactacggcttgccgaaaaatggtcgcttggacaatgggtgtcaatgct
catttaccaaaagatatcgctgttcgttgggcaactgaggtttcaagcgattttcacgct
cgcttttcggctacagcacgccgttatcgctacatcatttataatcatgcttatcgccct
ggcatattatcttcaggtgtcagtcattatcatggcgatttagacgttgagaaaatgcag
caagcagggcagcttttattgggcgaaaatgatttcacctcttttcgcgctgtgcattgt
caatctaatagtccttggcgaaacgtcatgcatttgaatgtgactcgccatggccactat
gtcgtcatcgacattaaagccaacgcctttgtccatcatatggtgagaaatatcactggt
agcctcattgtcgtcggccggggtgagcagcctcccgaatggataaaatggctgcttgaa
gccaaagatagaaaactggcaggagcaacagccaaagccgaaggactatatttggttgct
gttgattatccagaagaattttctttacccaaagaatcgcttggtccactatttttagct
gatcatttgagctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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