KEGG   Vigna radiata (mung bean): 106760544
Entry
106760544         CDS       T04126                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5C isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03020  RNA polymerase
vra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106760544
  09124 Replication and repair
   03420 Nucleotide excision repair
    106760544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vra03021]
    106760544
   03400 DNA repair and recombination proteins [BR:vra03400]
    106760544
Transcription machinery [BR:vra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106760544
  RNA polymerase III system
   RNA polymerase III
     106760544
  RNA polymerase I system
   RNA polymerase I
     106760544
DNA repair and recombination proteins [BR:vra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106760544
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Glucodextran_N
Other DBs
NCBI-GeneID: 106760544
NCBI-ProteinID: XP_014499453
UniProt: A0A1S3U0A6
Position
5:26586189..26591848
AA seq 213 aa
MECIASLIDNGSVESSRYFLSRRTVLEMLADRGYDVVQHANLTSSLSDFRSRFGQQPNHE
ALGFCVSHLSNPSNTVQVAFAGTDAIKMGTVMEICSRIVDSGNLKSLIIIVQSKITSFAQ
KKLMNLAYKVEIIRIEDLLINITKHVLQPKYEILTDEEKKALLTKHNLEEKQLPCMLKTD
VIARYYGLEKGQVVKITHSGPVVDSHVTYRCVA
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaatgcatcgcaagtttgatagacaacgggagcgttgagagcagtcgctacttcctg
agccgtcgaacggtgttggaaatgctcgccgacagaggctacgacgtcgttcagcacgca
aacctcacctcctcgctcagcgacttccgttcccgcttcggccaacaaccaaaccatgaa
gccctcggtttctgcgtttcgcatctctccaacccctccaacactgtccaggtcgcgttt
gccggaaccgatgctataaaaatgggaaccgtcatggaaatatgcagccggattgtcgac
agtggaaacttgaaatcgctcataatcattgtgcagagcaaaatcacttccttcgcacag
aaaaaattgatgaacttggcatacaaagttgagattatcaggattgaagatttgcttatc
aacattacaaagcatgttttacaaccaaagtatgagatactaactgatgaggagaagaaa
gcactgctcaccaagcataacttggaagagaagcagctgccttgcatgttaaaaactgac
gttatagctcgctattatgggctggagaaaggacaagttgtcaaaatcactcatagtggt
ccagtggttgattctcacgtgacttaccgttgtgttgcatag

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