KEGG   Vigna radiata (mung bean): 106777597
Entry
106777597         CDS       T04126                                 
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
Organism
vra  Vigna radiata (mung bean)
SSDB
Motif
Pfam: UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII SLFN-g3_helicase DEAD nSTAND3 UvrD-helicase Helicase_RecD ATPase SRP54 AAA_16 PhoH AAA_22 AAA_25 Ribosomal_S13_N AAA_32 AAA
Other DBs
NCBI-GeneID: 106777597
NCBI-ProteinID: XP_014520729
UniProt: A0A1S3VRN7
Position
11:complement(3249874..3261320)
AA seq 1268 aa
MDSQQSNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADTS
DRGAVGGPGSDHQSDASPVSAAPGSATKGGRSGNGGGHSSQMVDALAAGMSGLNFEDTGD
DDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH
KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWD
LSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGV
DDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYF
VFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVN
HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAP
GLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVA
VDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQ
GELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEP
ECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRM
HPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSY
LNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVA
SVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPL
WNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGSVGS
GAGTSSDRRSSRGRGSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIPSR
GAVHGPVGAVPHVPSPGSRGFGAGRGNSGAPIGNHLPHQQGTQQPIGNIGSTFNFPTLEN
PNSQPSVGGPLSQPGFANNMPVQGAGQSFRDQFSMPGMSQDFLGDDFKSQGSHVPYNVTD
FSTQASQSGYAVDFSTQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFT
QVGFNDPLQDDSTQSHFGVANANPLQSQMNSLYSQPFAHYNTQPLNMQASQQQSQAQNSQ
NQKIHYNG
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggactcgcaacagagcaatctattcgacaccgcttcgcagcccgacaccggcaacgac
gcctacacctttcttgaatttaacacacagggcgaggatttcgactaccctgaattccgc
gacccgattaggtcgccggtagcatggccaactccgtccgattcgcttgcggacacgtct
gaccgcggcgccgttgggggacctggctccgatcaccagtcagatgcctcgcctgtctcc
gcggctcctggaagcgctaccaagggcggccggtcggggaacggcggtgggcacagcagc
cagatggtggatgcgcttgccgcggggatgagcgggttgaattttgaggacactggggat
gatgataactatgagtatggtaaaggagatttcactgaacacgcttgccgttactgcggg
gtttccaatcccgcttgtgttgtgaggtgcaatgtaccttcgtgtcgtaagtggttctgt
aattcacgggggaacacttctggatcacatattgtcaatcacctggttcgggctaaacac
aaggaagtctgtctacacaaagatagtccgttgggagaaacaattcttgaatgctacaat
tgtggatgtcgcaatgtttttctccttggatttatttctgcaaagacggaaagtgtagtg
gtcttactatgtcgtgaaccttgcttgagtgttaatgccttgaaggacatgaattgggac
cttagtcaatggtgtcccttgattgatgataggtgtttcttgcagtggcttgtcaagatc
ccatctgaacaggagcagttaagagctcgccaaataagtgcacaacaaataaataaggtg
gaggaattgtggaagacaaatcctgatgcttcttttgaagaccttgagaagcctggtgta
gatgatgaacctcagtctgtggctttgaaatatgaagatgcatatcagtatcaaaatgta
tttgcacctcttattaagcttgaagctgattatgacaagatgatgaaagaatcacaaagt
aaggacaatgtcactattcgatgggatattggtcttaacaagaagcgtgttgcctatttt
gtatttccaaaggaggacaatgagttgcggcttgtacctggtgatgagttacgactccga
tattctggtgatgctgctcatcctgcatggcagtcagtgggtcatgtgattaagctaact
gcacaagaggaggttgcattggagctccgtgctagtcagggtgttcctgttgatgttaac
catgggttcagtgttgattttgtctggaaaagtacaagctttgataggatgcagggagct
atgaaaacttttgctgtggatgagacaagtgttagtgggtatatttatcatcacttactg
ggtcatgaagttgaggttcagatggtgcgaaatgctttgcctcgtcgctttggtgcacct
ggccttcccgagctgaatgcatctcaggtctttgctgtcaagagtgttcttcagaggcct
ataagtttgattcaaggaccacctggaactggtaagactgtaacttctgcagcacttgta
tatcacatggccaagcaaggtcagggacaggttttggtttgtgcacccagtaatgtagct
gtggaccagctagctgaaaagataagtgctactggattaaaggttgtgaggctttgcgca
aaatcaagggaagctgtcagttctcctgttgagcatttaactctccactatcaggttcga
catcttgacacatctgacaagagtgaacttcataagttgcaacagctgaaggatgagcaa
ggtgaactttccagcagcgatgagaaaaaatacaaagctcttaagcgagcaactgagagg
gagatttctcagagtgcagatgtgatctgctgtacatgtgttggtgctggagatcctcgg
ctagcgaattttaggttccgccaggttcttattgatgagtctactcaagcaactgaacct
gagtgcctcatacctttggtcctaggagcaaagcaggttgttcttgttggcgatcattgt
cagcttggtccagttattatgtgcaagaaagcagctcgtgctggattagctcagtcactt
tttgagcgacttgttctgcttggtgttaagccaattaggttgcaggttcagtaccgaatg
catccatgtctttcagaatttccctcaaacagcttctatgaaggcaccctgcaaaatgga
gtcactgttaatgaaaggcaatcatcaggaatcgattttccatggccagttccaaaccgt
cctatgtttttctatgttcagatgggacaagaagagataagtgctagtggaacatcttat
ttaaataggactgaggctgcaaatgttgaaaagattgtaactactttcttaaaaagtggt
gtggttccaagtcagattggtgtgataacaccgtatgaagggcaaagagcttatattgtg
aactatatgtcaagaaatggtgctctcaggcagcagctttacaaggagattgaggttgct
agtgttgattcttttcaaggaagggaaaaagattacataattctttcttgtgttagaagt
aatgaacatcagggcattgggttcctaaatgatcccaggaggctcaacgttgccttgact
cgagcaagatatggtattgttattttgggtaaccctaaagttttgagcaagcaacctctg
tggaatagtttattgactcactacaaggaacatgagtgcttagttgaagggcctttaaat
aatttgaagcagagtatggttcagtttcagaaacccaaaaagatttataatgaacgaagg
cttttttacggaggtggacctggaattgcggctaatgataattttggttctgttggatct
ggagctggaacaagttcagatcggaggagtagtcgaggaaggggatcttatatacctcct
ggtccaccaaatggaactcataagcctggagtgcatcctgctggatatcctgtgccaaga
gttcccttgcctcccttccatggtggtccccagtctcaaccatatgccattccttcacgt
ggggctgttcatggacctgttggggcagttcctcatgttccatctcctgggagtcgaggc
tttggggctggtagaggtaattctggtgctccaattggcaatcatcttccacaccaacaa
ggcacccaacagccgattgggaatattggatctacctttaacttccctactctagagaat
cctaacagccagccatctgttggtggtcctttatctcaacctgggtttgcaaacaatatg
ccagttcaaggggctggccagtcatttcgagaccaattttctatgcctggaatgtcgcag
gactttttgggcgatgacttcaaaagccagggatctcatgttccttacaatgtcaccgac
ttctctactcaggcttctcaaagtggatatgctgttgatttttctacacaaggagcacaa
ggtggattccctggaaattttcttaaccagaattctcaagctggctattctcgttttggt
tctggaaacgactttatgtcccaggactacatgggccatggttctcaaggtctttttact
caggtgggattcaatgacccgttgcaagatgattcaactcaaagccatttcggtgtggct
aatgccaaccctcttcagtcccagatgaattctctctactcccaaccatttgctcactac
aacacacagccgcttaacatgcaggcttcgcaacagcagtctcaggctcagaactcccaa
aatcagaaaatccactataacggttga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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