KEGG   Veillonella rodentium: 44547418_00598
Entry
44547418_00598    CDS       T05216                                 
Symbol
ffh
Name
(GenBank) Fifty-four homolog
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vrm  Veillonella rodentium
Pathway
vrm02024  Quorum sensing
vrm03060  Protein export
vrm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vrm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    44547418_00598 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    44547418_00598 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    44547418_00598 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vrm02044]
    44547418_00598 (ffh)
Enzymes [BR:vrm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     44547418_00598 (ffh)
Secretion system [BR:vrm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   44547418_00598 (ffh)
  Eukaryotic Sec-SRP protein
   44547418_00598 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase nSTAND3 ParA AAA_30 6PF2K AAA_16 AAA_31 AAA_33 ArsA_ATPase Mod_r cobW MeaB Thymidylate_kin AAA_17 AAA_18 ResIII
Other DBs
NCBI-ProteinID: SNV60607
UniProt: A0A239YPA5
Position
1:673718..675070
AA seq 450 aa
MAFDSLSEKLQDAFKSLKGKGKITEDDVNLALRQVRTALLEADVNFMVAKDFVKSIKEKA
LGEEVFGSLNPAQTVIKIVNDELTELLGGTQSRIMISSKPPTIIMLVGLQGAGKTTTAGK
LAVYLRKQGKHPMLVAADVYRPAAITQLQVVGKQIDIPVFADETPGADPVDIARRAVEQS
THMLKDVVIIDTAGRLAIDEPLMQELSNIKAAVRPHEILLVVDSMIGQDAVSTAQTFNEK
LGVDGVILTKLDGDARGGAALSIKAVTGLPIKFTGVSEKMDGFDVFYPDRMASRILDLGD
FKTLIENVQGAIDEEEAREMAKKMAKNNFTLDDFLKQMNQVRKLGPLQNIIGMLPGMGQV
KDQLKDLDLNSKEVRRIEAIITSMTAAERENPNILNGSRRKRIAKGSGTQVQDVNRLLKQ
FEEARKMMKRMKGLRGGKGALPKMPKLPFM
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggcatttgatagtttatcggaaaagctgcaagacgccttcaaatccttaaaggggaag
ggcaaaattacagaagacgatgtcaatcttgcgttgcgtcaggtgcgaacggctctttta
gaggcggacgttaacttcatggtggcaaaggattttgttaaatccattaaagaaaaagcc
ctcggtgaagaggtattcggttccctgaatccggctcaaacggttattaagatcgtaaat
gatgagttgacggagttattgggcggtacgcaaagtcgtatcatgatttccagcaaaccg
ccgacgattatcatgttggtcggtctgcaaggtgccggtaagacgacgacggccgggaag
ttagccgtataccttcgcaagcaaggtaagcatccgatgctcgtagcggccgatgtatac
cgtccggcggcgattacgcagttacaggtggtcggtaaacagatcgatattcctgtcttt
gcggatgaaactccgggtgctgacccggtggatatcgctcgtcgcgctgtggagcaaagc
acgcatatgttaaaggatgttgttatcatcgatacagcaggtcgcctggcgattgatgag
cctttgatgcaggaactgtccaatatcaaagcggctgtccgacctcatgaaatcctgctt
gttgtggactccatgatcggtcaggatgcggtgtcgacggctcagacattcaatgaaaaa
ttgggcgttgacggtgttattctcacaaaactcgatggcgatgcccgcggtggtgcggca
ttatccatcaaggctgtaacgggcttgccgatcaagttcaccggtgtcagcgagaagatg
gatggattcgatgtattctatccggatcgtatggcttcccgtattctcgacctgggcgac
tttaaaacactgattgaaaatgtgcaaggcgccatcgacgaggaagaagcccgtgaaatg
gccaagaaaatggcaaaaaacaatttcaccttggatgacttcctgaaacagatgaatcag
gtgagaaagttagggccgttgcagaatatcatcggcatgttgccgggcatgggtcaggtt
aaggatcaattaaaggatcttgatctgaacagtaaagaggtgcgtcgcatagaggccatc
ataacatccatgaccgcagcggagcgggagaatccgaacatactcaacggatcccgtcgc
aagcgtatcgcgaaaggttcgggtacacaggtacaagatgtaaatcgtttgttgaaacaa
tttgaagaagcgcggaagatgatgaagcgcatgaaagggttacgaggcggtaagggcgct
ttacctaagatgcctaaattaccgtttatgtaa

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