KEGG   Veillonella rodentium: 44547418_00724
Entry
44547418_00724    CDS       T05216                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vrm  Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:vrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vrm03019]
    44547418_00724 (rnc)
   03009 Ribosome biogenesis [BR:vrm03009]
    44547418_00724 (rnc)
   03036 Chromosome and associated proteins [BR:vrm03036]
    44547418_00724 (rnc)
Enzymes [BR:vrm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     44547418_00724 (rnc)
Messenger RNA biogenesis [BR:vrm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     44547418_00724 (rnc)
Ribosome biogenesis [BR:vrm03009]
 Eukaryotic type
  90S particles
   RNase
    44547418_00724 (rnc)
 Prokaryotic type
  rRNA processing factors
   44547418_00724 (rnc)
Chromosome and associated proteins [BR:vrm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     44547418_00724 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM I-TevI_DNA-bd CSN7a_helixI
Other DBs
NCBI-ProteinID: SNV62138
UniProt: A0A239YV84
Position
1:805803..806540
AA seq 245 aa
MGAVEAHKSKMTQAREESLQGLVSRLDIPVSDISIIDCAFTHTSYANEHKSKHIHHNQRL
EFLGDAVLDLIIGEYLFRTYPDMAEGSLTKIKAATVCEDSLASVSRTLDLGKYLLLGHGE
YASGGNDRNSILADTFESLIGAIYISTDYQTAMAFVLKHLTAYIDQALEGKRGKDYKTLL
QEYVQRDGDKHIVYRLLSESGPDHAKTFHMEVQIDGVTYEAGSGKSKKIAEQHAAQLTLE
RLMNK
NT seq 738 nt   +upstreamnt  +downstreamnt
atgggggcagttgaagcgcataagagtaagatgacacaagctcgtgaagaatctcttcag
gggcttgttagtcgtttagacatacctgtttcagatatatccattatagattgtgcattt
acacatacctcttatgcgaacgaacataaatcaaagcatattcatcacaatcagcgcttg
gagtttctcggtgatgccgtattggatcttatcatcggtgaatatttgttcagaacctat
ccggatatggcggaaggtagcttgaccaaaatcaaggcggctacggtttgtgaagactct
ttggcttccgtgagtcgcacattggatttaggtaaatatttattgcttggacatggggaa
tatgcttccggcggtaatgatcgaaactctatcttagctgatacatttgagtctcttatc
ggagccatttatatttctacagattaccaaacggctatggcttttgtgttgaagcatttg
accgcttatatagatcaagccttggaaggtaagcggggcaaagattataaaacattattg
caagagtatgtacagcgagatggggataaacatatcgtatatcgtctactcagtgaaagt
gggcccgatcatgccaaaacctttcatatggaggttcagatcgatggtgttacctatgag
gccggctcaggtaaaagtaaaaaaattgcagaacagcatgccgctcaattgaccctggaa
cggttgatgaataaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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