KEGG   Veillonella rodentium: 44547418_01033
Entry
44547418_01033    CDS       T05216                                 
Symbol
clpC_1
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
vrm  Veillonella rodentium
Brite
KEGG Orthology (KO) [BR:vrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:vrm03110]
    44547418_01033 (clpC_1)
Chaperones and folding catalysts [BR:vrm03110]
 Heat shock proteins
  HSP100
   44547418_01033 (clpC_1)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N AAA ClpB_D2-small AAA_5 AAA_16 Sigma54_activat AAA_22 nSTAND3 AAA_18 IstB_IS21 UVR AAA_14 AAA_7 Mg_chelatase AAA_28 TniB bpMoxR RuvB_N Zeta_toxin AAA_33 NACHT ATPase_2 DNA_pol3_delta2 Torsin AAA_23
Other DBs
NCBI-ProteinID: SNV66140
UniProt: A0A239Z597
Position
1:complement(1127355..1129802)
AA seq 815 aa
MMQRFTDDAQRVLSFAQEAALELGHDYVGTEHILVGLTKVKNGVAAKALNDLGVTTEDVL
EDVVEQVGRGNKEPNSVYMTPRVKHVLELAIEVANRMNHNYVGTEHILLGLLSDGGGVGI
AILRDMNIRNNDVVDAIRKILGSSQNGEPGGQDGSNSNGQLGDLADFATDLNESAKQGKI
DPVIGRDKEIQRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGNVPEILRNKRI
ISLSISAMLAGAKYRGEFEERLKKAIDEVQKHDDMIVFIDEIHTLVGAGASEGAMDAANI
LKPALARGEFQVIGATTLDEYKKHIEKDAALERRFQPVQVGEPSEEDALEILKGLRDRYE
AFHKAKITDEALEAAVTLSSRYITDRFLPDKAIDVVDEAASKVRMKVFSAAPDVKVLEDQ
LNNVKKEKEAAVTAQDFEKAAKLRDEEQRIAKEIDDKKSEAKETSDKKLVVTEEDIAVVV
AQWTGIPVSKIAEEESQTLLHLEDELHKRVVGQDDAVTAVAKAVRRARAGLKDPKRPIGS
FLFLGPTGVGKTELARALAASLFGDESAMIRLDMSEYMEKHTVSRLVGAPPGYVGYEEGG
QLTDAVRRKPYSVILLDEVEKAHADFFNILLQVLDDGRLTDSQGRTVDFRNTVIIMTSNL
GAKALQKDSPELGFLAAKKTDAVVNEKKPIDFEEAKKAVLDAVKRHFRPEFLNRIDEMIV
FHPLTESDLEHIVTILMSSVIKRLEERDLHLDITPEAMKLLVKEGSDFAMGARPLKRAIQ
RLIEDPVSDLILKGEAVEGTTIKADAKGDELLVTV
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgatgcaacgttttacggatgatgcacaacgggttctttccttcgctcaggaagcagcc
ttggaattaggccacgattatgtgggaacagaacatatactcgtaggccttacgaaggtg
aaaaacggtgttgccgcaaaagcacttaacgatttaggtgtaacgacggaggatgtactt
gaagacgtagtcgaacaagtgggacgcggaaataaagagcctaattccgtatatatgaca
cctcgtgttaaacatgtgttggaacttgccattgaagtggcgaatcgcatgaatcataac
tatgttgggacggaacatattctgttgggtttactcagcgatggcggcggtgtaggtatc
gccatcctgcgggatatgaatatccgtaacaatgatgtggttgatgctattcgcaaaatt
ctcggttcttcacaaaacggtgaaccgggtggtcaagatggatctaatagtaatggtcaa
cttggtgatttagccgattttgccacagatcttaatgagtcggcaaaacaaggtaaaatc
gatcctgttatcggacgtgataaagaaattcaacgtgtcattcaaattcttagtcgcaga
accaaaaataaccctgtccttatcggtgaaccgggcgtaggtaaaacggcgattgctgaa
gggttggcacaacgtatcgtgaatggtaatgtgcctgaaattttgcgtaataaacggatc
atttctcttagtatcagtgccatgctcgcaggcgcaaaataccgaggtgaatttgaagaa
cggttgaaaaaggctatcgatgaggtccaaaaacatgatgacatgattgtcttcatcgat
gaaattcataccttggtcggtgccggtgcaagtgaaggcgctatggatgcggcgaatatt
ttaaaaccggccttggcgcgtggtgaattccaggttatcggtgccacaacgctcgatgaa
tataagaaacatattgaaaaggatgcggctttagaacgtcgtttccaacctgttcaggtg
ggagaaccgtctgaagaggatgctttggaaatcttaaaggggttacgggatcgctatgaa
gcattccataaggctaagattaccgatgaagccttggaagcggctgttacattatcaagt
cgatatattacggaccgtttcttaccggataaagccattgatgtggttgatgaagcggca
tccaaagtgcgtatgaaggtattctccgcggcgcctgatgtcaaggttttggaagatcag
cttaacaatgtaaagaaggaaaaagaagcggctgtaacggcgcaggattttgaaaaggct
gccaagcttcgcgatgaagaacaacgcatcgcaaaggaaattgatgataagaaatcggaa
gctaaagagacgagcgacaagaaactggttgttacagaagaagatattgcagttgtagta
gcacaatggacgggtattcccgtttcaaaaattgcggaagaagagtcgcaaaccttactt
catttggaggatgaacttcataaacgcgttgtgggtcaggacgatgcggttacagctgta
gctaaggctgtacgtcgtgcgagagcgggccttaaagatccgaaacgtcctatcggttcc
ttcttattcttaggtcctacgggcgttggtaaaaccgaattggcgagggctttggcagca
tcgttattcggggatgaatcagccatgattcgacttgatatgtcagaatatatggaaaaa
cataccgtatcgcgcttagtcggtgcgcctccgggatatgtgggatatgaagaaggcggt
caattgactgatgccgtccgtcgtaaaccatatagcgtcatcctgctcgatgaagtagaa
aaagcccatgcggactttttcaatatcttgttacaggttcttgatgacggtcgacttaca
gatagtcaaggtcgtacagtagattttagaaatacagttatcatcatgacaagtaacttg
ggggctaaagcgttacagaaggattccccggaattgggattcttggcggcaaagaaaacg
gatgccgtggtaaatgaaaagaaaccgatcgactttgaggaagctaagaaggctgttcta
gatgcggtaaaacgtcatttcagaccggaattcctaaatcgtatcgatgaaatgattgta
ttccatccattgacagaatccgatttggaacacattgttacgattttgatgagcagtgtt
ataaaacgtcttgaagaacgcgatttacatttggatattacaccggaagcgatgaaatta
ctcgtgaaagaaggttccgatttcgctatgggtgcccgccctttgaaacgtgctattcaa
cgtttgattgaagatcctgtatccgaccttatcttgaaaggtgaagctgtggaaggtacg
accatcaaggctgatgccaaaggtgacgaacttcttgtgactgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (34)   

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