KEGG   Aliivibrio salmonicida: VSAL_I0188Help
Entry
VSAL_I0188        CDS       T00782                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vsa  Aliivibrio salmonicida
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vsa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VSAL_I0188 (mutM)
Enzymes [BR:vsa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VSAL_I0188 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VSAL_I0188 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:complement(229584..230402)
Genome map
AA seq 272 aa AA seqDB search
MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQKLVGQRIQSIRRRAKYLM
IDTPEGTAIIHLGMSGSLRILDEAIPTAKHDHVDLVLDSGKLLRYNDPRKFGAWLYSEVG
VSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTIVVGVGNIYASESLFMAK
INPKAPVGTLTLAQIERLVSDIKKVLETAIKQGGTTLKDFNQVDGKPGYFAQELQVYGRA
GEACLICQSLIQEQKIGQRNTFWCEKCQPINQ
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactaccagaagtcgaaaccagccgattaggaataacaccacacctacaaggt
caaactatcaaagcgatcacagtcagaacagaaaagctgcgctggccgatcccacaagag
ctacaaaaactcgtagggcaaagaattcaatccatccgccggcgtgctaaatatttaatg
atagacaccccagaaggcacagccatcattcatttaggtatgtctggtagtctacgtata
ctcgatgaggcgatcccaacagcaaaacacgatcatgtcgatcttgttttagatagcggt
aaattgcttcgttataacgatcctcgtaaatttggtgcttggctatattctgaagtaggc
gtttcacatgacgtgcttgccaagcttggcccagagccacttaccgatgtatttaatgtg
gaatatctagcagaaaaagcaaagaataaaaaaatcgtcgtaaaacagtttattatgaac
aacactattgtggtgggggtggggaatatctacgccagtgaatccttatttatggcaaag
ataaatcctaaggcaccagtaggtacattgacgttagcccaaattgaacgattagtatct
gacattaaaaaagtactagagacggctattaaacaaggtggaaccaccttaaaagacttt
aaccaagtcgatggtaaaccgggatattttgcacaagaattgcaagtttacggacgagca
ggagaggcgtgcttaatttgtcagtcattgatccaagaacagaaaatagggcaaagaaat
acgttttggtgtgaaaagtgccaacctattaatcagtaa

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