KEGG   Aliivibrio salmonicida: VSAL_I0682Help
Entry
VSAL_I0682        CDS       T00782                                 

Gene name
recD
Definition
exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
vsa  Aliivibrio salmonicida
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:vsa00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    VSAL_I0682 (recD)
Enzymes [BR:vsa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     VSAL_I0682 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:764777..766801
Genome map
AA seq 674 aa AA seqDB search
MLKQLQHLMAHGVLRPLDLQFAKFLGQQEKNSDKNLIMLLAAMTSHELGKGHVCIDIEQV
EQGDLFTLPAKYRDALLALVPEKNQWISELSAASTISNGTEATPLAFDGTRLYLQRYWSF
EQRVANRITKAAQSVAVNAQLSNTLDELFARQYHFLFSGLKKLENNNQVSRQQLVCDMLD
VVGSSSSELDWQAIDGVLLSATKSSELEPLDNLIPTKHCVNWQKVAAAVALTRRFSVISG
GPGTGKTTTVTKLLASLVTQAQQDNKSIAIKLVAPTGKAAARLTESIGQAVQSIGLAPEV
KEAIPTDASTLHRLLGYIPNQVDFRHNKSNPLHLDVLVVDEASMVDLPMMARLLDAVPEH
ARVILLGDKDQLASVEAGAVLGDICQFTKMGYSQNQAQQLSQLTGYALPVQSHNNAVADS
LCMLQKSYRFDARSGIGQLAKAINEGCKFKVEAVWAKGFSDIRFHDLSNDSYNAMITMMV
NGYRSYLGHIHAGDKPEVALKAFSQIQLLCAMREGDFGVVGLNQRIEKGLRKSDLIPHGD
EVWYSGRPVMVTQNDYGVGLYNGDIGIAMPDPVDQRLRVYFDMPDGSIRGVLPSQLPEHE
TVYAMTIHKSQGSEFEHTVLALPAEFSPILTRELIYTGVTRAKKKLDLFATEKVVARGVM
IKTQRNSGLAALMS
NT seq 2025 nt NT seq  +upstreamnt  +downstreamnt
atgcttaagcaattacaacacttaatggctcatggtgtacttcgcccattggatcttcaa
tttgctaagtttttaggccaacaggaaaagaacagcgataaaaacttaatcatgttgctc
gcagcaatgactagccatgagttaggtaaaggccatgtgtgtattgatatcgagcaagta
gagcaaggtgatctgtttacgttgcctgcaaaatatcgtgatgcattgttagcgttagta
ccagagaaaaatcagtggattagtgagttatctgcggcatcgacgatatctaatggcaca
gaagcaacgccactagcctttgatggaactcgtttgtatttacaacgttattggtcgttt
gaacagcgtgttgccaaccgtataactaaagcggcgcaaagtgtggcggtaaacgctcag
ttatcgaatacattggatgagctatttgctcgccaataccattttttattcagtgggctt
aaaaaattagagaataataatcaagtatctcgtcagcaattagtgtgcgatatgctcgat
gttgtgggatctagttctagtgagttagattggcaagcgattgatggggttttactctca
gccactaagtcttcagaattagagccgctggataacttaatcccaaccaaacactgtgtg
aattggcagaaagttgcggcagcggtagcgttaactcgtcgattctcggtgatctctggt
ggtccaggaacgggtaaaacaaccacggttaccaagcttttggcttccctagtgactcaa
gctcagcaagataataaaagcatcgcaattaagttagttgctccaacgggtaaagcggca
gcgcgtttgactgaatccattggtcaagcggtgcaatctattggtttagcaccagaagta
aaagaagcgatcccgacagacgcaagtacgctgcatcgcttgcttggttatattccaaac
caagtggattttcgtcataacaaaagcaatccattacaccttgatgtattggtggtggat
gaagcctcgatggtcgatttacctatgatggcccgactactcgatgcggtaccagaacac
gcgcgtgttattttattgggcgataaagatcagctagcctcggttgaagcgggagcggtg
ttaggtgatatctgtcaatttactaaaatgggttacagccagaatcaagcacaacaatta
tctcaattaacaggctatgctttgcctgtgcaatcgcacaataacgcggtcgccgatagc
ttgtgtatgctgcaaaagagttaccgttttgatgcgcgctcagggattggacaattagct
aaagccattaatgaaggctgtaaatttaaagtagaagcggtgtgggccaaagggttctct
gatattcgttttcatgatttaagtaatgacagctataacgcaatgatcaccatgatggtg
aatggctatcgcagttatttaggtcatatccatgcgggcgataaaccagaagtggcacta
aaagcctttagccaaattcaattattgtgtgcaatgcgcgaaggggactttggggttgta
ggacttaatcaacgaattgaaaaaggattaagaaaatctgatttgattcctcatggtgat
gaagtgtggtattccggtcgcccggtgatggtgactcaaaatgattatggcgtaggtctt
tataatggtgatattggtattgcgatgccagatcctgttgatcaacgtttacgtgtttat
tttgatatgccagatggttcgattcgtggagtattaccaagtcaattaccagagcatgaa
accgtgtatgcgatgacgattcataaatctcaagggtctgagtttgaacatacagtttta
gctttacctgctgagttcagcccaatcttaacgcgagagttgatttatacgggtgtcaca
cgagctaagaaaaaactcgatctgttcgcaacagagaaagtggtggcgagaggtgtaatg
attaaaactcagagaaacagtggattagctgcgttgatgagctaa

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