KEGG A.salmonicida_LFI1238: VSAL

Aliivibrio salmonicida LFI1238: VSAL_I1886

Entry

VSAL_I1886 CDS A.salmonicida_LFI1238

Gene name aspS

Definition aspartyl-tRNA synthetase (EC:6.1.1.12)

Orthology K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]

Pathway vsa00970 Aminoacyl-tRNA biosynthesis

Class Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:vsa00970]

SSDB

Motif Pfam: tRNA-synt_2 GAD tRNA_anti tRNA-synt_2d tRNA-synt_2b
PROSITE: AA_TRNA_LIGASE_II

Other DBs NCBI-GI: 209695353
NCBI-GeneID: 6987436
UniProt: B6EGJ1

Position 1:2021027..2022802

AA seq 591 aa
MRSHYCGNLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGVVQVVVDPDMKDIFSTA
NQLRNEFCIKFTGEVRVRPDSQVNKDMSTGEVELYATGLEIINRSEALPLDFNQTNSEEQ
RLKYRYIDLRRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFLS
SNQVRDITERLVHDMWKELLDVELGQFPIMKFSEAIRRFGSDKPDLRNPLELVDIADLLK
DVEFQVFAGPANDEKGRVAVIRVPGGASLSRKQIDEYGKFVGIYGAKGLAWMKVNDRAAG
LEGVQSPVAKFLNADVVNGILERTEAESGDIILFGADKANIVSEAMGALRIKLGDDLELT
DKKAWAPLWVIDFPMFEEDGEGNLHAMHHPFTSPLGMTAEELKVNPAAANSDAYDMVING
YEVGGGSVRIHNAEMQTAVFGILGIEAKEQQEKFGFLLEALKYGTPPHAGLAFGLDRLAM
LLCGTENIRDVIAFPKTTAAACLLTNAPSPANPDSLAELAIAVKFAEKKDA

NT seq 1776 nt +upstreamnt +downstreamnt
atgcgcagccattactgtggtaacttgaacaagtcccttgcaggacaaactgtagaactt
tgcggctgggtaaaccgtcgccgtgatttaggcggtcttatcttcattgatatgcgagat
cgtgaaggtgtcgttcaggtagttgttgacccagatatgaaagatatcttttcaactgct
aaccaactgcgcaatgaattctgtattaaatttactggcgaagtacgtgttcgtcctgac
agccaagtaaataaagatatgtctacgggtgaagttgaactttacgcgacaggtcttgag
atcatcaaccgttctgaagcacttccattggatttcaatcaaacgaactcagaagagcaa
cgcctgaagtaccgttatattgatttacgtcgtccagaaatgagtgaccgtatcaagtta
cgtgctcgtgcatctagctttgttcgtcgtttcttagatgagaacctattcttagatatc
gaaacaccagtactaacaaaagcaacgccagaaggcgctcgtgattacctagtaccaagc
cgtgttcataaaggcagcttctacgcacttccacaatcaccacagttgtttaagcaactt
ctgatgatgtctggttttgaccgttactaccaaatcgttaaatgtttccgtgatgaagat
ttacgcgctgaccgccaacctgaatttactcaaatagatatcgaaacctctttcctttcg
tctaaccaagttcgtgatattactgaacgtttggttcatgacatgtggaaagaacttctt
gatgttgagcttggtcaatttccaataatgaaattctctgaagcgattcgtcgttttggt
tctgataagccagatctacgtaacccactagaattagtggacattgcagatcttcttaaa
gacgtagaattccaagtattcgctggtcctgcaaatgacgaaaaaggccgtgtagcggtt
attcgtgttcctggtggcgcatcgctttctcgtaagcaaattgatgaatacggcaaattt
gttggtatttacggcgcgaaaggccttgcttggatgaaagtaaacgatcgtgctgctggt
cttgaaggagttcaatctcctgttgctaaattcctaaacgcagacgttgtaaatggtatt
ttagaacgcacagaagctgaaagtggcgatatcatcctatttggtgcagataaagcaaac
attgtttctgaagccatgggtgcattacgtatcaagcttggtgatgacttagaactaaca
gacaaaaaagcatgggcacctctttgggttattgatttcccaatgtttgaagaagatggc
gaaggtaacttgcatgcaatgcaccacccatttacttctccattaggcatgacagcggaa
gagcttaaagtaaaccctgctgctgcaaactctgatgcttacgatatggttatcaacggc
tatgaagttggtggtggctctgtacgtattcacaatgctgaaatgcaaactgcagtattc
ggtatcctaggtattgaagcgaaagagcaacaagagaaatttggtttcttacttgaagcg
cttaaatacggtacgccgccacacgcaggtcttgctttcggtcttgaccgtcttgcaatg
ctactttgcggtactgaaaacattcgtgacgttattgcattccctaaaacaacggctgca
gcatgtttacttacgaatgctccaagccctgcgaatccagattctcttgcagaattagcg
attgcagtaaaatttgctgagaaaaaagacgcttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (5)   
   PROSITE (1)   
All databases (17)

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