KEGG   Vibrio scophthalmi: VSVS12_02850
Entry
VSVS12_02850      CDS       T04650                                 
Symbol
rsmE
Name
(GenBank) 16S rRNA (uracil(1498)-N(3))-methyltransferase
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
vsc  Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:vsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vsc03009]
    VSVS12_02850 (rsmE)
Enzymes [BR:vsc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     VSVS12_02850 (rsmE)
Ribosome biogenesis [BR:vsc03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    VSVS12_02850 (rsmE)
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4 ProQ_C SpoIIID
Other DBs
NCBI-ProteinID: ANS86589
UniProt: A0A1B1NS78
Position
1:3105776..3106507
AA seq 243 aa
MRIPRIYHPEIIQQLGVVELSEDAAGHIGRALRMKEGQQVLLFDGSGAEFPATISEVTKK
TVHVDVTERIERSSESPLDLHLGQVMSRGDKMEFTIQKSVELGVNTITPLISERCGVKLD
QKRFEKKMEQWQKIAISACEQCGRNTVPEIRPIMKLEDWCAEEYDGLKLNLHPRAKYSIN
TLPTPVEKVRLLIGPEGGLSSDEIDMTEQYQFEETLLGPRVLRTETAALTAITALQVRFG
DLG
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcgaatcccacgaatttatcacccagaaatcattcagcagcttggcgtcgttgaactt
agtgaagatgccgcaggccatatcggccgtgctctacgcatgaaagaaggccaacaagtg
ctattgtttgatggcagcggcgcagaatttccggccaccatcagtgaagtgaccaagaaa
accgtgcacgttgacgtgactgagcgtatcgaacgcagcagtgaatcaccactggatttg
catcttggccaagttatgtcacgtggtgacaaaatggaatttaccatccaaaaatcggtt
gagctgggcgtaaatactattacaccactcatttctgaacgttgtggtgtcaaacttgac
caaaagcgttttgaaaagaaaatggaacaatggcaaaaaattgcgattagtgcctgcgag
caatgtggccgtaacaccgtgccagaaattcgcccaatcatgaaattggaagattggtgt
gccgaagagtacgacggtttaaaactgaatctgcatcctcgcgcgaaatactcaatcaat
accctgccgacgcctgtagaaaaagtgcgattattgattggcccagaaggcggtctatcg
agcgatgaaatcgatatgaccgagcaataccaatttgaagagacgcttctcggcccacgt
gtattacgtaccgaaaccgcggcgttaacagcaattacagccctacaagttcgttttggc
gatcttggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system