KEGG   Vibrio scophthalmi: VSVS12_03797
Entry
VSVS12_03797      CDS       T04650                                 
Name
(GenBank) RNA helicase
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:3.6.4.13]
Organism
vsc  Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:vsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vsc03009]
    VSVS12_03797
Ribosome biogenesis [BR:vsc03009]
 Prokaryotic type
  rRNA helicases
   VSVS12_03797
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 AAA_30 AAA_22 CMS1 DUF1529
Other DBs
NCBI-ProteinID: ANS87497
UniProt: A0A1B1NUV9
Position
2:864570..865946
AA seq 458 aa
MTDSFKSLPLQPELLTTLDSLGYTQMTPIQAQSLPIVLEGKDVIGQGKTGSGKTATFALG
LLSNLKVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSLE
HGAHILVGTPGRILDHLSRDRIDLSELNTLVLDEADRMLDMGFQDALDAIIDQTPTQRQT
LLFSATFPKEIEAIASRIMKAPQLVKVESTHQTSTIEQHFYKINATEDRDEALETLLMAH
RPESSVIFCNTKKEVMAVADELHNRGFSVTELHGDLEQRERDQALTMFANKSISILVATD
VAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGQAFSFYSDKDGYRTALIEEY
MDIEIAPEALPHRPAGEPFDAAMTTIQILGGKKLKVRAGDILGSLTKEAGIDGKCIGKIN
ILAMVSYVAVEKSVANRALKQLQNGKIKGKAFKARIMK
NT seq 1377 nt   +upstreamnt  +downstreamnt
ttgaccgattcatttaaatctttgccactacagcctgagctgctaacgacccttgattca
ttgggctacactcaaatgaccccaatccaagcacaaagcttgcctatcgttcttgaaggt
aaagatgtgattggtcaaggcaaaaccggttcaggtaaaacggcgacgtttgcgctgggt
ttgctttcaaacctaaaggtgaaacgttttcgtgtgcaatctttagttctgtgtccaact
cgcgaattggctgaccaagtagcgaaagagatccgtactctagcgcgtggtattcataac
attaaagtgctgacgctgtgtggtggtatgccaatggggccgcaaattggttctctggaa
catggcgcacatatcttagttggtactccgggtcgtattcttgatcaccttagccgcgat
cgtattgacttgtcagagttaaacactttggtgctggatgaagcagatcgcatgttagac
atgggtttccaagatgcgcttgatgcgattatcgatcaaacgcctactcaacgccaaacg
cttctgtttagtgcgactttcccgaaagagatcgaggcgattgcttctcgcatcatgaag
gcgccacaactggttaaagtggaatcaactcaccaaacttcgaccattgaacagcacttc
tacaaaatcaatgcaacagaagatcgtgacgaagcattagaaacgttgctgatggcgcac
cgcccagaatcatcagtgatcttctgtaacaccaagaaagaagtaatggcggttgctgac
gaactgcacaatcgtggctttagtgttacagaacttcacggtgatttagagcagcgtgaa
cgcgatcaagcattaaccatgtttgcaaacaagagtatttcaattcttgttgcgaccgat
gttgccgcgcgcggcctggatgttgataaccttgatgcggtatttaactttgaattgtca
cgcgatcctgaagtacacgtgcaccgcattggtcgtactggccgcgctggttcaaaaggt
caagcatttagcttctacagcgacaaagatggctaccgtacggctttgattgaagagtac
atggatattgaaattgcgcctgaagcgttacctcaccgcccagcgggtgaaccgtttgat
gcggcaatgacaacgattcaaattcttggtggtaaaaaactgaaagtacgtgctggtgat
atccttggttctctgacgaaagaagcgggtatcgatggtaaatgcatcggtaagattaat
attctggcgatggtttcttacgttgcggtggaaaaatcagtcgcaaatcgtgccttgaag
cagctgcaaaacggcaagatcaaaggtaaagcgtttaaagcgcgcatcatgaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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