KEGG T04936: BSZ05

Vibrio mediterranei: BSZ05_05400

Entry

BSZ05_05400       CDS       T04936

Name

(GenBank) ATP-dependent DNA helicase RecG

K03655

ATP-dependent DNA helicase RecG [EC:5.6.2.4]

Organism

vsh Vibrio mediterranei

Pathway

vsh03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:vsh00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BSZ05_05400
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_05400
Enzymes [BR:vsh01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSZ05_05400
DNA repair and recombination proteins [BR:vsh03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BSZ05_05400

SSDB

Motif

Pfam:

DEAD Helicase_C RecG_wedge RecG_dom3_C tRNA_anti-codon ResIII SecA_DEAD AAA_30 SNF2-rel_dom HHH_5 Cdd1 IstB_IS21 Glyco_tran_WecG nSTAND3 SLFN-g3_helicase DNA_pol_lambd_f PhoH CobA_CobO_BtuR

Other DBs

NCBI-ProteinID:

ASI89286

Position

1:1183676..1185754

AA seq 692 aa
MAQLLSAISLSSLSGVGAKVAEKLAKVGLHSVQDLLFHLPHRYEDRTRIYPIVRLHPGLW
GSVQGKVMSSDVAFGRRKMLTVKVSDGNGTITLRFFNFTAAMKNNFSEGRLIVAYGEVKR
GNHGLEIIHPEYKFQTEGKAPKLEQTLTPVYPTTEGLRQLTLRNLTDQALELMDKAAVDE
LLPSGLYNQQITLAEALHTIHRPPPTINLDDFDEGKHPAQQRLIIEELMAQNLSMLAVRS
KGQQDAAIGLAPVEKLKNQLLEQLPFSPTGAQSRVVQEIETDLAKPIPMMRLVQGDVGSG
KTLVAALAAVRAIEHGYQVAMMAPTELLAEQHAINFAGWFEAMGIQVGWLSGKQKGKAKE
AELARIASGEAQMVVGTHALFQESVDFHNLALVIIDEQHRFGVHQRLELREKGAKQGFYP
HQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDDIIERVKNACLH
EGKQAYWVCTLIDESEVLEAQAAAETAEDLQRKLPDLKIGLVHGRMKPAEKQQVMKQFKN
NELHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSP
LSKTAQKRLGVLRESNDGFVIAQKDLEIRGPGELLGTKQTGLADFKIADLVRDQRLVPEV
QRIARHVHEQYPENAKKIIDRWLGDREFYAKA

NT seq 2079 nt +upstreamnt +downstreamnt
atggctcagctgttatcggcaatttctctttcttcgctttctggcgtaggagctaaagtc
gctgaaaaactggcgaaagtcggcttacactcggttcaagatttactgtttcacttacct
caccgttatgaagatcgtactcgtatctatccgatcgttcgtttgcatcctggcctttgg
ggatcggtgcaagggaaagtcatgagtagtgatgtggctttcgggcgtcgcaagatgttg
acggttaaagtaagcgatggcaacggtactattacactacgcttcttcaattttaccgca
gcgatgaagaacaacttctctgaaggccgccttattgtcgcttatggtgaagtgaagcgt
ggcaaccatggtcttgaaatcatccatccagagtacaaatttcaaaccgaaggtaaagcg
ccaaagctagagcaaaccttaactccggtttacccaaccacagaagggttaaggcagctc
acactgcgtaacctcactgaccaagctcttgagctcatggacaaagcagcagtagacgag
ttgcttccaagcggtctttataaccaacaaattaccctcgccgaggcgctacacactatc
catcgtccaccaccaacgattaacttggacgactttgatgaaggtaagcaccctgctcag
cagcgactgattattgaagagctgatggcgcaaaacctttctatgcttgcggtacgcagt
aaaggtcaacaagatgcagccattggcttagcgcctgttgaaaagctaaaaaatcagcta
cttgagcaactacctttttcccctacaggtgcgcaatcaagagtggtgcaagaaatcgaa
actgatcttgctaaacctattcctatgatgcgcctagttcagggcgatgtgggttctggt
aaaaccttggtagccgcgctcgctgctgttcgtgcgatagaacatggctatcaagtggct
atgatggcaccgaccgaattacttgcagagcagcatgccataaactttgcaggttggttt
gaagccatggggatacaagttggttggttatcaggaaaacaaaaaggcaaagctaaggaa
gcagagttggcacgtattgccagcggtgaagctcaaatggtcgtagggacgcacgcccta
ttccaggagtcggttgattttcacaaccttgcgctggttattattgatgagcaacaccgt
tttggtgtccaccagcgcttagagctgcgtgaaaaaggtgctaaacaaggtttctaccct
catcagttaattatgactgccacgccaatcccaagaaccttagccatgacggcatatgcc
gacttggagacctcggtaatcgacgaactgccaccaggaagaaccccgattcaaactgtt
gccattcctgatacaaaacgcgacgacatcattgagcgtgtcaaaaatgcttgcttacac
gagggcaaacaagcgtattgggtttgtacattaatcgatgaatcagaggtattagaagca
caagcagcagctgagaccgccgaagatctgcaacgtaaactgcctgatcttaaaatcggt
ttagttcatggtcgaatgaaaccggctgaaaaacaacaagtgatgaagcagtttaaaaat
aacgagctgcaccttctggttgcaaccaccgtcattgaggtcggtgtggatgtccctaac
tccagtttaatgatcatcgaaaacccagagcgccttggtctagctcaattgcatcagtta
cggggccgtgttggccgtggtagcgtggcaagtcattgtgtgctgttgtatcactcccca
ctctctaaaactgctcagaagcgcttaggcgtgctgagggaaagtaatgacggctttgtt
attgcccaaaaagatctagagattcgtggcccaggtgagctacttggcaccaaacaaact
ggactggctgactttaaaattgccgatttagtacgtgaccaaaggctggtaccggaagtc
caacgaattgcgcgacatgtgcacgaacagtaccccgagaatgccaagaaaattattgat
cgctggttaggagacagagagttttacgccaaagcataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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