KEGG   Vibrio mediterranei: BSZ05_07180
Entry
BSZ05_07180       CDS       T04936                                 
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vsh  Vibrio mediterranei
Pathway
vsh03070  Bacterial secretion system
vsh05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BSZ05_07180
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    BSZ05_07180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsh02044]
    BSZ05_07180
Secretion system [BR:vsh02044]
 Type II secretion system
  General secretion pathway protein
   BSZ05_07180
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DDOST_48kD LUD_dom
Other DBs
NCBI-ProteinID: ASI89581
Position
1:1546534..1548558
AA seq 674 aa
MKSWLKTSTWLLMGSLMAAPAVSANEFSASFKGTDLHEFINIVGRNLDKTIIVDPSVRGK
VDVRSYDVLNEEQYYSFFLNVLEVYGFAVVEMDNGILKVIKAKDAKTSAIPVVGDSDNVT
GDSVVTRVVAVKNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLADII
RRVDQAGDKEVEVVELKNASAAEMVRIVDALNKTTDAKNTPALLQPKLVADERTNSILIS
GDPKVRERLRRLINQLDVEMATKGNNRVQYLKYAKAEELVDVLKGVSDNLQKEKQSGSTS
GSGANRSEVMISAHPDTNALVITAPPDIMKALLEIIKQLDIRRAQVLIEALIVELADVDG
ANLGVQWGNASAGSVVQFSNTGASIGSVMVGMEEAKDKTTTETRYDNQGNPYNVETKTSG
DYTKLASALSGVQGAAVGIALGDWTALITAVSSTSNSNILSSPSITVMDNGEASFIVGEE
VPVLTGSTAGSNNSNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNVLGANGAVD
VRFAKRQLNTSVMIQDGQMLVLGGLIDERAAESESKVPFLGDIPYLGRLFTSTSTTVEKK
NLMVFIKPTIIRDGMTSDGITQRKYNYIRAEQLFKADKGLKLMDDGYIPVLPEFNNTTRY
PSEIQAFFEQVEAK
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaaaagttggcttaaaacaagtacctggttattgatggggagcctgatggctgcgcca
gcggtatcagccaatgaattcagtgccagtttcaagggaactgacctacatgagtttatc
aatatcgttggacgcaacctcgataaaactataattgttgacccgtcagtgcgcggtaaa
gtcgatgtgcgtagctatgatgttctaaatgaagagcaatattacagtttttttcttaat
gtcttagaagtctatggtttcgcggtcgtagagatggacaatggcattttgaaggttatc
aaagcaaaagatgccaagacctccgcgattcctgtagttggtgattccgataacgtcact
ggagacagtgtcgtgacacgtgtggtcgcggtgaagaatgtttcggtaagagagctttct
cctttgttgcgccaactaaatgataatgctggtgcaggtaatgtggttcattatgaccct
gcgaacatcattcttattaccggtcgtgccgcagttgttaatcgtctagcagatattatt
cgccgtgtagaccaagcaggcgataaagaagttgaagtggttgaattaaagaacgcttcg
gccgcagaaatggttcgtattgttgatgctctaaataagacgacggacgctaaaaatacc
ccagcactcttacaacctaagctggtggcggatgaacgaactaactctatcctgatttct
ggtgaccctaaggttcgtgaacgcctgcgccgtttgattaatcagcttgatgttgaaatg
gcgaccaaaggcaacaaccgagttcaatatctgaaatatgccaaagctgaagaacttgtg
gatgtcctaaaaggggtgtctgataaccttcagaaagagaagcagtctggctctacgtca
ggcagtggagcaaaccgctctgaagtgatgatcagtgcgcaccctgataccaacgcgctt
gtgattactgctccgccagacattatgaaagctctacttgagatcattaagcagctagac
attcgtcgtgcgcaggttctaattgaagcgctgattgtagagcttgccgacgttgatggc
gctaaccttggcgtgcaatggggtaatgcctcggcgggcagtgtggttcagttttcaaat
accggggcttccataggtagcgtgatggtcggtatggaggaagctaaagacaaaaccaca
acagaaactcgttatgataatcaaggtaacccgtacaacgtagagactaaaacatctggt
gactataccaagcttgccagcgcactcagtggtgtccaaggtgctgctgtgggtattgct
cttggcgattggaccgctcttattacagcagtttccagtacttccaactcaaacattctg
tcttctcctagcattactgttatggataacggcgaagcgtcgtttatcgttggtgaagaa
gtgccagtattgaccggttcgacagctggctcaaacaacagcaatccattccaaacggtt
gaccgtaaagaagtaggtatcaagcttaaagtcgtcccacagatcaacgaaggtaactcg
gttcagcttaatattgagcaagaagtttccaatgttcttggtgctaatggcgcggtagat
gtgcgttttgcgaagcgtcagcttaacacttcggtgatgatccaagatggtcagatgctg
gtactgggtggtttgattgatgaacgtgccgctgaaagtgagtcgaaagtccctttcctt
ggggatatcccatatctaggtcgcttgttcacttccaccagtacaacggttgagaaaaag
aacctcatggtcttcattaaaccgacgattatccgtgatggcatgacgtctgatggtatc
actcagcgtaaatataactacattcgtgcagagcagttattcaaggcggataaaggcttg
aagctgatggatgacggctacattccagtattacctgagttcaataataccacgcgctac
ccatctgaaattcaagcattctttgaacaggtagaagcgaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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