KEGG   Vibrio splendidus: VS_0041Help
Entry
VS_0041           CDS       T00812                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
vsp  Vibrio splendidus
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:vsp00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    VS_0041 (fadB)
   01212 Fatty acid metabolism
    VS_0041 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    VS_0041 (fadB)
   00650 Butanoate metabolism
    VS_0041 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    VS_0041 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    VS_0041 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    VS_0041 (fadB)
   00310 Lysine degradation
    VS_0041 (fadB)
   00380 Tryptophan metabolism
    VS_0041 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    VS_0041 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    VS_0041 (fadB)
   00281 Geraniol degradation
    VS_0041 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    VS_0041 (fadB)
Enzymes [BR:vsp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     VS_0041 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     VS_0041 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     VS_0041 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     VS_0041 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:complement(38691..40862)
Genome map
AA seq 723 aa AA seqDB search
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKHAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLELGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKSYQDLGAMYQVPQLLLDMAAKGESFYDGQQA
SSL
NT seq 2172 nt NT seq  +upstreamnt  +downstreamnt
atgatttaccaagctaacaccttacaggtaaaggaattacaagatggtattgcagaactt
agcttctgtgctccggcctctgtaaacaaactcgaccttgctactttagaatcactagac
aaagcgttagatgctcttaatgctcacgctggattacgtggtttaatcttaacttcaaac
aaagacgcgttcatcgtaggcgcagacatcactgaatttcttggcctatttgctaagcca
gaagcagaacttgatgaatggttaagattcgctaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgcccttggtggcggctgtgaatgt
gtcttagcgaccgatttccgtatcggtgacaagaccaccagcattggcctacctgaaacc
aaacttggcatcatgcctggttttggtggttgtgtgcgcctacctcgtgttatcggtgct
gacagcgcaatggaaattatcacacaaggcaaagcatgccgtgcagatgaagcgcttaaa
gttggcttgttagatgcgattgttgaaacagaccagttactagaatcggcgatcaacacc
gtttctctggctgctaatgaaaaattagactggcaattacgccgcaaacaaaaaacatca
gcattatcgctaagcaaactcgaagcgatgatgagctttaccatggcgaagggcttagtt
gctcaaaaagcagggcctcactacccagctccgattacttctgtgattgcgattgaagaa
gcagcacgcagcgatcgcgatgcagcactcgacatcgaacgtaaacacttcgttaagcta
gcaaaatctgaagaagcgaaagctctggttggcctgttcttaaatgaccaatacattaaa
ggcttagcaaaacatgctggtaaatctgcaaataaagcgactgaacgtgctgcagtactt
ggtgctggcatcatgggcggcggtattgcttaccagtcagcattgaagggcgtgccagtg
atgatgaaagacatcgcacaggcgtctcttgagcttggtatgaacgaagcttctaagctg
ttgaataaacgcttatcgcgcgggcgcctagatggattcaagatggcaggcattctgtct
tctattactccaagtctgcattatgcaggtgttgaacaatctgatgtgattgtggaagcc
gttgtagaaaaccctaaagtaaaagcagcagtgctgagtgaagttgaaggtctcgtgggt
gaagatacagttcttacatcaaacacctcaacgattccaatcaacctgttagcgaaatct
ctaaaacgcccagaaaacttctgtggcatgcacttctttaacccagtgcatcgcatgcca
ttggttgagatcatccgtggcgagcatacttcagaagagaccattaatcgcgtggttgct
tacgcagcgaagatgggcaaatcaccaatcgttgttaacgactgcccaggcttcttcgtt
aaccgtgtactttttccttactttggcggtttcagcatgttgctacgcgacggtgctgac
ttcacgaagatcgataaagtgatggaacgtaagttcggttggccaatgggcccagcttac
ttgctagacgttgtaggtttagacacagcacatcatgcacaagcagtaatggcgcaaggt
ttcccagagcgtatgggtaaagaaggccgtgatgcaattgacgcactttacgtcgctgaa
aaatacggccagaagaacggcagcggtttctacacgtacagcgtagacaaacgtggtcgc
ccgaagaaaaccttctctgaagacattcttcctatcttggctgacgtatgccaacagccg
caagactttgatgaccagacaattatccaacgtgtgatgattcctatgatcaacgaagtg
gtgctttgtttagaagaaggcattatcgcgacaccgcaagaagcggatatggcactggtt
tacggtttaggcttccctccattcagaggcggcgtattccgctacttagacagtgtgggt
attggtaacttcgttgaaatggcgaagagctaccaagacttaggtgcaatgtaccaagtt
cctcaactattgcttgatatggcagcgaagggcgaaagcttttacgacggtcaacaagcc
agttctctgtaa

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