KEGG   Vibrio tasmaniensis: VS_0186Help
Entry
VS_0186           CDS       T00812                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vsp  Vibrio tasmaniensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vsp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VS_0186
Enzymes [BR:vsp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VS_0186
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VS_0186
DNA repair and recombination proteins [BR:vsp03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VS_0186
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
1:181527..182336
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQELKRLEGQVIRSISRRAKYLL
IETDTGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLTNGKILRYNDPRRFGAWLWSAPD
EIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGVGNIYANEALFSSR
INPLRSASKVTKQEWLLLTKEIKQVLATAIRQGGTTLKDFAQADGKPGYFAQELQVYGKA
GEQCPNCAELIQELKIGQRNTFYCSSCQV
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaagttgaagtaagccgcatggggatctcgcctcatttagtcggt
gagacgattaaaacgcttacctttcgtacccccaaactgcgttgggatatccctcaagaa
cttaagcgattagaagggcaggtgattcgctctatctcgcgtcgtgcaaagtatttattg
attgagacagatacaggcactgcgattgtgcatcttggtatgtcaggttcactgcgcgtg
ttggatgccgatttcccgccagcaaaacacgatcacgtggatcttaagttaaccaatggc
aagatcttgcgttataacgatccgcgtcgctttggtgcgtggttatggtcggcgcctgat
gagatacatactgtattacttggttctggtcctgagccactaactgacgacttcaacgca
gattacattgctgagaaagcagaaaagcgtaaggttgccgtcaaacagttcattatggac
aacaaagtcgtggtcggtgtgggtaatatctacgccaatgaagctctgttttcttcacgt
attaatcctttgcgctctgcaagtaaggttacaaaacaagagtggctcttgttaaccaaa
gagatcaagcaagtactcgcgacggctatcagacagggtggaacaacgctaaaagacttt
gcccaagcggatggaaaaccgggatattttgctcaagagctgcaggtttatggtaaggct
ggtgaacagtgtcctaactgtgcagagctgattcaggaacttaaaatcgggcaaagaaac
acgttttattgctctagctgtcaggtatag

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