KEGG T00812: VS

Vibrio splendidus: VS_1518

Entry

VS_1518 CDS T00812

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

vsp Vibrio splendidus

Pathway

vsp03410	Base excision repair
vsp03420	Nucleotide excision repair
vsp03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:vsp03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:vsp03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:vsp03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

218709509

NCBI-GeneID:

7161090

UniProt:

B7VNV5

Position

1:complement(1652386..1653264)

AA seq 292 aa
MLTTTDINTEQMMRLTKLAIATLWACSLSSHSSYLPPDHLVLANTYQQGIDVSEYWKSEK
LDGIRALWDGQHLYTRNGNRIYSPKWFTKNLPKVHLEGELWAGRGKFHLVQSTVLDHTPS
DVAWRQIDLMLFDMPGATGDYQKRYYNILHWVSMIGEPHVSYIEHVPIQNEEALFYQLDN
VDERNGEGLMLRKITSRYQAGRSNDLLKLKRHHDAEATVIGYKGGTGKYKGMMGSILVHT
EEGVEFYIGSGFSDQMRLAPPEIGSRITFRYNGFTQNGKPKFARFVREKSEY

NT seq 879 nt +upstreamnt +downstreamnt
ttgttgaccactacagatattaatacggagcagatgatgagattaaccaaattggcgata
gccactctatgggcgtgttcgctttcttctcattcatcctatttaccgcctgatcatctg
gtgctcgcaaacacataccaacaaggcattgatgtttctgaatactggaagagtgaaaag
cttgatgggattcgtgctctttgggacggacaacacctttatactcgaaatgggaatcgc
atttactcaccgaagtggtttacaaaaaacttaccgaaggtacaccttgaaggggagctc
tgggcaggaagaggaaagttccacttagtccaatctaccgtcctcgatcacacacctagt
gatgttgcgtggcgccaaatagacttgatgctgtttgatatgccaggggctactggcgat
tatcaaaagcgctattacaacatattgcattgggtaagtatgattggagaacctcatgtc
agctacatcgaacatgtacctattcaaaatgaagaagctctgttttatcaattagacaat
gtcgatgaacgtaatggcgaaggtttgatgctcagaaagatcaccagtcgttatcaagca
ggtcgaagcaatgacctgttaaaactaaaaaggcatcacgatgccgaagccacagttatt
ggctacaaaggcgggacagggaagtataaagggatgatgggttcgattttggttcacacg
gaagaaggggttgagttttatatcggaagcgggttcagtgatcaaatgagacttgcgccg
cctgagatcggcagccgtattacctttcgctacaatggctttactcaaaatggaaaaccc
aagtttgcgcgcttcgttagagaaaagagtgagtattaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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