KEGG T00812: VS

Vibrio atlanticus: VS_3000

Entry

VS_3000           CDS       T00812

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

vsp Vibrio atlanticus

Brite

KEGG Orthology (KO) [BR:vsp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vsp03016]
    VS_3000
Enzymes [BR:vsp01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     VS_3000
Transfer RNA biogenesis [BR:vsp03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    VS_3000

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 MTS Methyltransf_4 Methyltransf_11 Methyltransf_31 Cons_hypoth95 Met_10 Methyltransf_15 Methyltransf_12 PrmA DREV DUF6579

Other DBs

NCBI-ProteinID:

CAV20278

UniProt:

B7VM88

Position

1:3150741..3151850

AA seq 369 aa
MANLEVNPQRYQEQLAEKTERLTEMFSEYNVPELEVYESPEQHYRMRAEFRVWHEGDDMY
YVMFNQETKEKYRVDQFPAASRLINDLMPLLTDAMKDNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLGEQWIQDAKALKQQLNDEGFNLNLIGRARKMKIVLDRDYVIEKLDVNGDSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQDSKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANKIENVQIIRMSAEDFTVAMEGKREFRRLQQANIDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYERIMYISCNPETLKENLDILSETHDITRFALFDQFPYTHHME
AGVFLERKA

NT seq 1110 nt +upstreamnt +downstreamnt
atggcgaatttagaagtaaacccgcaacgctaccaagaacaactggcagaaaagactgag
cgtcttactgaaatgttctcagaatataatgtgcctgagctggaagtgtatgaatctcca
gaacaacactaccgcatgcgtgcagagttccgcgtgtggcatgaaggtgacgatatgtat
tacgtcatgttcaatcaagagaccaaagaaaaataccgcgtagaccagttcccagcggct
agccgcctgatcaacgacctaatgcctctattaacggatgcaatgaaggacaaccactct
ctacgccacaaactattccaagtagacttcctttctacattaagcggcgagattttggtg
tcactgctttaccaccgccaattgggtgaacagtggattcaagatgctaaagcacttaaa
cagcaattaaacgatgaaggttttaacctaaacctgatcggccgtgcgcgtaagatgaaa
atcgtactggaccgcgactacgttatcgaaaagctagatgtgaatggtgatagctacatc
taccagcaagttgagaacagctttactcaaccaaacggtaaagtagcagagaaaatgctg
gagtgggctgtcgactgtactcaagacagcaaaggcgacttgcttgaactttactgtggt
aacggtaacttctcactagcactggcacagaacttcgaacgtgtactggcaacagaacta
gcgaagccgtcagtagaatctgcgcaatacaacatcgcagccaacaagattgaaaatgtt
cagatcatccgcatgtctgcggaagattttaccgtagcaatggaaggcaagcgtgaattc
cgtcgtctacagcaagcgaacatcgatcttaagagctacaactgcaacactatctttgtt
gatccaccgcgttcaggtatggatgtcgatacttgtaagatggttcaaggctacgagcgt
atcatgtacatctcttgtaaccctgagacattgaaagagaacctagacattctaagcgaa
acacacgacatcacccgttttgctctatttgaccagttcccttacacacaccatatggaa
gcaggtgtattcctagagcgtaaagcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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