KEGG   Vibrio tubiashii: IX91_03990
Entry
IX91_03990        CDS       T03445                                 
Name
(GenBank) pseudouridine synthase
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
vtu  Vibrio tubiashii
Brite
KEGG Orthology (KO) [BR:vtu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vtu03009]
    IX91_03990
Enzymes [BR:vtu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     IX91_03990
Ribosome biogenesis [BR:vtu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    IX91_03990
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: AIW13365
UniProt: F9T0P1
Position
1:complement(843405..844439)
AA seq 344 aa
MSQDNAKRLNKFISETGFCSRREADRLIEQGRVTINGKVPEMGTKVQLGDDVRVDDKPIA
AATDKPVYIALNKPTGITCTTERDIPGNIVDFIGHKKRIFPIGRLDKPSDGLIFLTNDGD
IVNKILRAGNNHEKEYVVRVDKPITEEFIKQMSSGVNILDTITLPCTVTKETKFSFRIVL
TQGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGQWRYLTDAEVAEILVMCEDSSG
TEEASKVDSKGKRIRKATDAKLFDSREENQDSKARRNQKNRTFKGRNADEFRHAPNSKKG
RDSGNNSSDSKAKPNKGKTFYKPSSDKSQRPAKPRSGGTLSLKK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtcacaagataacgctaaacgcctcaataagtttatcagcgaaacaggtttttgctca
cgccgtgaagctgaccgcctcatcgagcaaggccgcgtcaccattaatggtaaagtacct
gaaatgggcaccaaggttcagctaggtgatgacgtccgagttgatgataagccaatcgca
gctgccactgataaacctgtttacatcgcactcaataagccgacgggtattacctgtacc
acagaacgtgatattccgggtaatatcgttgacttcatcggccacaagaaacgtattttc
ccgattggtcgcttagacaaaccttcagacgggttgatcttcttaaccaacgacggcgat
atcgtaaacaagattcttcgcgccggtaataaccacgaaaaagagtatgtggttcgcgta
gataagccgatcactgaagagtttattaagcagatgtcttcaggggtgaatatcctcgat
accatcactcttccttgtactgtgactaaagagactaaattctcgttccgcattgtgctt
actcaaggtctcaaccgccaaatccgtcgtatgtgtgaagcattaggctatgaagtattc
aagcttcgccgtgtacgcattatgaacatctcgcttgatgggattcctaatggacaatgg
cgttacctaacagatgcggaagtagccgagattctggtaatgtgtgaagactctagcggc
actgaagaggcatccaaagtagatagcaagggtaaacgcattcgcaaagcgactgatgct
aagctgtttgatagccgcgaagaaaaccaagactctaaagcgcgtcgtaatcaaaagaat
cgtacttttaaaggccgtaacgccgatgagttccgccatgcaccaaactcgaagaaaggc
cgcgatagtggtaacaactcaagcgactcaaaagccaagccaaataaaggtaagactttc
tataagccttccagtgataaatcacagcgccctgcaaaaccacgctctggcggcactttg
agtttgaagaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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