KEGG   Vitis vinifera (wine grape): 100242052
Entry
100242052         CDS       T01084                                 
Name
(RefSeq) transcription initiation factor IIA subunit 2
  KO
K03123  transcription initiation factor TFIIA small subunit
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100242052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100242052
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     100242052
SSDB
Motif
Pfam: TFIIA_gamma_N TFIIA_gamma_C
Other DBs
NCBI-GeneID: 100242052
NCBI-ProteinID: XP_002285630
UniProt: A5AJ11
Position
18:complement(join(6264706..6264846,6268282..6268332,6268434..6268562))
AA seq 106 aa
MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK
GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ
NT seq 321 nt   +upstreamnt  +downstreamnt
atggcaacgtttgaactttatcgtagatcgacgatcgggatgtgtttgacggaaacattg
gacgagatggttcagaatggtactttgagtccagagctcgccattcaagttcttgtccag
ttcgacaagtctatgactgaagctctggaaagtcaagttaaaagcaaggtcaccattaag
ggacatctgcacacctacagattctgcgacaatgtgtggaccttcatcttacaagatgct
ctgtttaaaaatgaggaatcccaggagaatgttggtcgggttaaaatagtcgcatgcgac
tcaaagctgctgacacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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