KEGG   Vitis vinifera (wine grape): 100254604
Entry
100254604         CDS       T01084                                 
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100254604
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vvi01007]
    100254604
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100254604
Enzymes [BR:vvi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     100254604
Amino acid related enzymes [BR:vvi01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   100254604
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    100254604
 Prokaryotic type
   Other AARSs
    100254604
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g zf-FPG_IleRS tRNA-synt_1_2 tRNA-synt_1e
Other DBs
NCBI-GeneID: 100254604
NCBI-ProteinID: XP_010649747
UniProt: F6HDF8
Position
5:complement(join(3429425..3429664,3430142..3430321,3430661..3430910,3432393..3432466,3432945..3433070,3433363..3433527,3433610..3433737,3434496..3434624,3437262..3437393,3437620..3437767,3440652..3440788,3441222..3441508,3441709..3441940,3444609..3444759,3446302..3446409,3446997..3447065,3447285..3447397,3449243..3449312,3450941..3451042,3451118..3451272,3451447..3451645,3455109..3455198))
AA seq 1094 aa
MPLVKSLASNSSSLFSPKDARMAIQASSYKVLSQRTASSFRSMNSVSLLYLRGSSSVHVP
SLLKTATYSSYSSDNSSSSSKRRSRGPVMAAKKASEAAKQEDGRYKHTVDLPKTAFGMRA
NSTSREPEIQKLWDDNQVFKRVVDRNNGGNFILHDGPPYANGDLHMGHALNKILKDIINR
YKLLQNYKVHYVPGWDCHGLPIELKVLQSLDQDARRELTPLKLRAKASRFAKATVKNQMA
SFKRYGVWGDWNNPYLTLDPEYEASQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAE
LEYPEGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAAVAVNAKL
QYSVVEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGLKLVIKKT
LLGSDLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGMKYGLPIL
SPVDDDGKFTEEAGQFSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKPTI
FRATEQWFASVEGFRQVAMTAIGQVTWIPAQAENRISAMTSSRSDWCISRQRTWGVPIPV
FYHVQSKEPLMNKETIDHVKSIVSQKGSDAWWYMTVEELLPDKYRNKASGYEKGTDTMDV
WFDSGSSWAAVLESRNELSCPADLYLEGTDQHRGWFQSSLLTSVATKGRAPYSSVITHGF
VLDEKGFKMSKSLGNVVDPRTVIEGGKNLKEAPGYGADVLRLWVSSVDYTGDAMIGAQVL
RQMSDIYRKLRGTLRYLLANLHDWKADNAVPYCDLPMIDRHALFQLENVVKNIRESYESY
QFFKIFQIIQRFAIVDLSNFYFDVAKDRLYVGGTTSFTRRSCQTVLAAHLLSIVRVIAPI
LPHLAEDVWQNLPFQYTNEDGSIAEFVFESRWPALNEKWLTFPTEEIDFWGKILELRTET
NKVLEVARGGKLIGSSLDAKVYLHASDASLAPRLQEMCSTNNDADTLHRIFITSQVEILS
SLDDELVKNIPYTGEYLIQGKNKIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCY
NVVNVQLPAMAAVS
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgcctttggtcaaatccttggcttcaaactcatcatctcttttctcccccaaggacgca
agaatggctatccaagcctcttcttataaggttttgtcacaaagaacagcatcatctttt
aggagtatgaattcagttagcttattgtatttaagaggaagctcttcagttcatgttccc
tcccttttaaagactgcaacctattctagttattcaagtgataattcttcttcttcttca
aagcggcgatctcgtggacctgttatggcagcaaagaaagcatctgaagcagcaaagcaa
gaggatggaagatacaagcacacagttgatctgccaaagacagcatttggcatgagagca
aactcaacttcaagggagcccgaaattcagaaattatgggatgataaccaggtgttcaaa
agagtggttgataggaataatgggggaaatttcattcttcatgatggccctccatatgct
aatggtgatctacacatgggtcatgctctaaacaagattttgaaggatataattaatcgt
tataagcttcttcaaaattataaagttcattatgtgcctggttgggattgccatggccta
ccaattgagttgaaagttctacagtcattggatcaggatgctagaagggagctcacacca
ttaaagttgagagcaaaggcatccagatttgccaaagcgactgttaagaaccagatggca
tcatttaagcgctatggagtatggggagactggaataatccttatctaactcttgatcca
gaatatgaagcatcccagatcgaagtgtttggccaaatggccttgcaagggtatatctat
agaggcagaaagccagttcactggagtccctcgtcacgtactgctcttgcagaggctgag
ttggagtatcctgaggggcatatttcaaagagcatatatgctattttcagattagtgagt
gcacctgtaacttcaggtacctcattagaggattttcttccagatttatgcttggctata
tggaccacaaccccttggactattccggccaatgctgctgttgcagtgaatgctaagctt
caatactctgtggtagaagtacactcacccttggaagatgtttcaaagtccaaacagaat
gagaagggaaggcttggaaatgctctgaaggaacaaaaaaatctttttcttgtagtagca
tcagatcttgtaccaacacttgaagcaaaatggggcctgaaacttgtcatcaagaaaaca
ctattgggatcagatcttgaaaactgcaggtatatccatccaatagacaaaagggaatgc
cctgttgtcattggaggagattatattactacagaatcgggaactggattggtccataca
gctccaggtcatggtcaggaagattatgtaactggcatgaaatatggactgcctattctt
tctcctgtagatgatgatggaaagttcactgaagaagctggccaattcagtgggctagat
gtacttggggatggtaatgctgctgtcgtaagattcttggatgagaacttgtctattatc
atggaagaaccatacaaacacaagtatccatatgactggagaactaaaaaacctacaata
tttcgagcaactgaacaatggtttgcatcagtagaagggttccggcaggttgctatgact
gcaattggccaagtaacatggattccagctcaggcagaaaacagaatttcggcaatgacc
tcaagccgctctgattggtgtatttcacggcaaaggacatggggcgtccctattccagtc
ttttatcatgtacaatcaaaagaacctctcatgaacaaagagacgattgatcacgtcaaa
tctatagtatcccaaaagggtagtgatgcatggtggtacatgacagtagaggaactgctc
cctgataagtatcgtaataaagcctctggctatgaaaaggggactgatacaatggacgtt
tggtttgactcaggttcttcttgggctgctgtgttggagagcagaaatgaacttagttgt
cctgcagatttgtatcttgaaggtacagatcagcatcgtgggtggtttcaaagttctttg
ctaaccagtgttgctacaaaaggaagagctccatattccagtgttattacacatggattt
gtactggacgagaaaggtttcaagatgagcaaatctttgggtaatgttgtagatccacgc
acggtgattgaaggtgggaaaaacctaaaggaagcacctggctatggagctgatgttctg
cgactctgggtttcaagtgtagattataccggggatgcaatgattggggctcaagtcctt
cgtcaaatgtctgacatatataggaagttgcgaggaactttgcgataccttttggcaaat
ttgcatgattggaaagctgataatgctgttccatactgtgatcttcccatgattgatcgt
catgcgctgtttcagcttgaaaatgttgtaaagaacatcagagaaagctatgaaagctac
caattctttaagatattccagatcatacaaaggtttgccattgttgatctatcaaatttc
tactttgatgttgccaaagatcgactctatgttgggggcacaacaagctttacaaggaga
agttgtcaaacagttcttgcagcacatctactttccattgtgagagtaattgctccaata
ttgcctcatttggctgaagatgtatggcagaaccttccttttcagtatacaaatgaagat
ggctctattgccgaatttgtttttgaatcaagatggccagccttgaatgagaagtggctt
acctttcctacagaagaaattgatttctggggaaaaattctggagttgagaactgagact
aacaaagtcctagaggtggctcgtggtgggaaattgattggttccagtctagatgcaaaa
gtgtatcttcatgcttctgatgccagcctggcccccagattgcaggaaatgtgttcaact
aacaatgatgcagatacattgcatcgcatattcataacatcccaggtggagattctttct
tctttggacgatgaactggtgaaaaatataccgtacacgggggagtacctcattcaaggg
aagaacaaaatctggattggtgtgtcacgtgcagatggctctaaatgcgaaagatgctgg
aattactcacttcaagttggttccttttctgagcatccgacactctgtggccgatgttat
aatgttgtcaatgttcaactccctgctatggctgccgtcagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

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