KEGG   Vitis vinifera (wine grape): 100257338
Entry
100257338         CDS       T01084                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X2
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100257338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100257338
Enzymes [BR:vvi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     100257338
DNA repair and recombination proteins [BR:vvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     100257338
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 SAP
Other DBs
NCBI-GeneID: 100257338
NCBI-ProteinID: XP_002274714
Position
8:join(21013126..21013163,21013582..21013771,21013849..21013949,21014586..21014665,21014843..21015076,21015272..21015597,21016560..21016670,21018524..21018661,21018800..21018847,21019155..21019235,21019485..21019644,21020217..21020338)
AA seq 542 aa
MILGFQSFINLTHFAVTPLSLRARTLVYLKARTTGSQRLVCYSSEIESSSTLTSKKVKKE
SSSMSSRPNTKKGVIEENASRTQSIEIQSIRDDPAKVKAMTVQELTTTLRSVGVPAKGCK
RDLVLALKSFLDNKASDESSQAEEQLELNILSKRKAKNLSVEDHEQNVNIVSDASGLKQS
KRRAKQSPVEAKIEVNTEIINEKEKPSIKNKEASGNKLYQGERKASSRSSIKQIAVTERI
DISMNEPEPWTVLTHKKPQEGWIPYNPRTMRPPPLTGDAKFVKLMSWNVNGLRGLLKSKG
FSALKLAQREDFDVLSLQETKLQEKDVEAIKQSVIEGYENSFWTCSVSKLGYSGTAIISR
IKPLSVRYGLGISDHDSEGRLLTAEFESFYLLSGYVPNSGDGLKRLSYRVTQWDSALGSY
MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFRK
QHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIGLVL
KL
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgattttaggctttcagagcttcattaatcttacacattttgcagtaactcctctgagt
ttgagagccagaacgttggtttatctgaaagctagaacaacagggtctcaaagactcgtt
tgctactcatcggagatcgaatcgtcatcaactcttactagcaagaaagttaagaaagag
agtagttccatgagtagtaggccaaataccaaaaagggtgttatcgaggaaaatgcatcc
agaacccaatcgattgaaattcagagcatcagggatgatccggctaaagtcaaggcaatg
acggtccaagaactgacaacaacattaaggagtgttggagtccctgccaaaggctgtaaa
cgagatctcgtgttggcattgaaatcgttcctggacaataaagcctctgatgaaagttct
caggcagaagaacagctggaattaaatattttgtccaagaggaaggccaagaatttatct
gttgaagaccatgagcaaaatgtcaacattgtttcagatgcttctgggcttaaacagagt
aagagaagggcaaaacagtctcctgttgaggctaaaattgaggtcaatactgaaatcatc
aatgaaaaagagaagccatcaatcaaaaataaggaggcttcaggcaacaagctctatcag
ggggagagaaaagcatcctcaagaagtagtatcaaacagattgcagttactgaaagaatt
gatatatctatgaacgaacctgaaccatggactgttcttacccacaagaagcctcaagag
ggctggattccatataaccccaggaccatgaggcctcctcctcttacaggggatgccaag
tttgtaaaactaatgtcttggaatgttaatgggttaagaggcttgctgaaatcgaagggc
ttctctgcactgaaactggcacaaagagaagattttgatgttttgtctctgcaagagacc
aaactgcaggagaaggatgtggaagcaatcaaacagagtgtcatagagggctatgagaat
agtttttggacatgtagtgtttccaaacttggatattctggtactgcaattatttcacgg
ataaagccactttcagtcagatatggtctaggcatatcagatcatgatagtgaaggacgg
ctcctgacagcagagtttgaatctttttatttgttaagtggatatgttcctaattctgga
gatggtttgaaaagactgtcatatagggttacacaatgggattcagctcttggaagttat
atgaaagagctcgaaaagtcaaaacctgtcattttgactggtgatctaaactgtgctcat
caagagatagacattcatgatcctgctggaaatagaagaagtgctgggtttactgacgaa
gaaagacaatcgttggagaagaatttcttatcaaagggttttgtggatagctttagaaaa
caacaccctggtgttgttggctatacttactggggttataggaatggctgccgcaaatct
aataaagggtggcggctggactacttccttgtctcagaatccatagctgacaaggttcat
gactcatacatcctccctgacattggtggaagtgatcattgtccaattggcctcgttctc
aagctctag

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