KEGG T01084: 100258105

Vitis vinifera (wine grape): 100258105

Entry

100258105 CDS T01084

Definition

DNA ligase 4-like

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:vvi03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT PTCB-BRCT mRNA_cap_enzyme

Other DBs

NCBI-GI:

225445943

NCBI-GeneID:

100258105

Position

AA seq 1162 aa
MCEETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGS
YGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMT
SGGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKS
IFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWK
KLHGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILD
GEMLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQLCYVAFDILYVGDTSVIHQTLKERH
ELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIV
LKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADHS
GPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPD
IWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMELVH
SSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSNMM
FYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQSKGIKYQAAKLRGDIIHCS
WVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYYQDLDISDIKQLLSNVDRS
DNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWELLSKLALRRMKLEVSMGGG
KVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCNKKLHVVGYQWLEGCLEEGR
RLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKEGKQGRGKAPPE
SISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIGKPPKIYENESDASDSGEK
MEEEGTKMGGNHAIHGVECKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRA
QDIELDSENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQG
AEPVKKKKVSYKDVAGALLKDW

NT seq 3489 nt +upstreamnt +downstreamnt
atgtgcgaagaaaccaagttcagtgttctgtgcagcctcttcacatggattcagaggagc
agaacctccgccaagaagcgttccaagttccgcatattcctcgacaccttttgcataaac
ggccaccagttcagcgccatacgattgatcctccccaacctcgaccgcgagaggggctcc
tacggactcaaggagtccgtgctcgccacttgcctcattgacgccctcggcatgtccagg
gagtccgaggacgcccttcgcctcatcaactggcgaaaagggggtgctaaaaccggcgcc
aatgctggaaattttgccatggtcgcggctgaagtgctgcagcgtcggcaaggaatgact
tctggtggactgacaatcaaggagttgaatgatttgcttgattgtttagcttcaagtgaa
aatagaacagagaagacttcagtcctttctaccctgatcaagaaaacaaacgcacaggaa
atgaagtggattgtcatgataattctgaaagacctgaagttgggaatcagtgaaaaaagc
atcttccatgaattccatccggatgcagaggacttgtttaatgtcacatgcgacttgaaa
cttgtttgtgaaaagctcaaggatcgaagtcaaaggcataaacgccaggatattgaagtt
ggaaaagctgtgcgaccccaactagctatgagggttgctgatgcaactgcagcatggaag
aagcttcatgggaaggaagtggttgttgagtgcaagtttgatggtgaccgcatccaaatt
cataagaatggagaagaaatacacttcttctcaaggaacttccttgatcaccctgaatat
aaatatgcaatgtcaaacattgttgcacaaaatcttttggttgataggtgtatacttgat
ggtgaaatgttggtatgggacatatcgctgaatcgttttgctgagtttggttcaaatcag
gaaatagcaaaggcagcaaaggaggggcttgacagtgatcggcagttgtgctatgttgct
ttcgacattctttatgttggagatactagtgtcattcaccaaaccttgaaggaacggcat
gagcttttgcagaaagtcgtgaagcctttgaagggtcgttttgaaatcttagtaccttct
ggtggtcttaatactcaccgtccttctggggaaccatgttggtcacttattgcttatgat
gtggatgatgtcgagaggttcttcaagaaaactgttgaaaatagagatgaaggcattgtt
ttaaaagaccttggttcaaaatgggagccaagtgacaggagtggaaagtggttaaagttg
aagcctgagtatgttcatgcaggttctgaccttgatgttcttataataggagggtattat
ggttctgggcgtcgtggaggagaggtagctcaattcttggtgggccttgctgaccattca
ggccctgacacatatcccagacgattcatttccttttgcagagtgggtactggactttct
gatgacgagcttgatgctgttgtaacaaaattgaagccttatttcaggaaaaatgaatac
ccaaaaaaggcaccaccaagcttttatcaagtcacaaataattcaaaagagagaccagac
atttggattgatagccctgaaaaatcaattatactttctattactagtgatatccgaaca
ataaggtctgaggtatttgctgcaccatacagcctgaggttcccacgcattgattgtgtg
agatatgacaagccttggcatgaatgccttgatgtgcaatcttttatggaattggtacat
tcaagcaatggtaccacgcagagaggggcagattatgggcgcatgcaagatagtaaacca
aagcgcatgaaatcctctaagaaaggagagcaaaagactgctcatgttgttccttctcat
tttatgcagactgatgttaccaatgtcaagggcgaaacgctaatattttcgaacatgatg
ttttactttgttaatacacctccaacccattctcttgattccttgcataaattggtggtt
gagaatggaggaaccttctcaatgaatctgaataattcagttacacattgtgttgcagct
caaagtaaaggtatcaaatatcaggcagcaaagcttcgtggagatattattcattgttct
tgggtctttgactgttgttcacagaaaaagctccttcctttacagccaaagtactttctc
ttcctttctgaacattcaaagaagaagttacaagaggaaattgacaaattttctgactcc
tactaccaggatcttgacatttcagacatcaagcagcttttaagcaatgtggataggtca
gacaactccaaaactattgattactacaagaacaaatattgtccaaaggaaaagtggtcg
cgctttcatgattgctgcatttgcttccactcctcaatacagtcttctaattcggattgg
gaacttctgtcaaaacttgcgctgaggaggatgaagcttgaagtttccatgggtggtggt
aaagttggcaataatctttctcaggccacccatttagtggtcttttcagtaccaggattt
gatttggacttcagtgacataatggaaagtttctcaccagcagagaaacatcttctatgt
aataaaaagttgcatgttgttgggtatcaatggttagaaggctgcttggaggagggccgg
aggttgcaagaacagaaatatagcctgaaacctgagggcttggaagagtcaaactttgga
gaatgcaaacatgatatagatgtagaagccccttctgttttggacagtgtggagaaccaa
aatttggtgtcttttccagacaaagaagggaaacaaggtagaggaaaagctcctccagaa
agcattagtatcttggcctcgcccaagagggacgagaaaaggaaaagaggaaggcctgct
ggcccaagcacaaagaaaggaaaagcaggtttcagccaagctcgaaggacacggccccgg
attggtaagccacctaagatatatgaaaacgaatcagatgcaagcgattcaggtgaaaaa
atggaagaggaagggaccaaaatgggagggaatcatgcaatccatggagtcgaatgcaag
gaatgtccagaaatccaagagactgaaatagtagaagattctgaatcatcacaaagagga
aagacagaagaaaaggaggttgcactagataatgtacgtgaaaaatggttagatagagca
caggacattgaactggatagtgaaaataaggttgacaacagtaaaaagactgagaagctg
gaagttatggttgatccagttcaagccatgctactagacatgataccgagccttggagtg
aaaaaggcggaaagtacaaatcctattattgatgatgagaagcctccagtagagcagggt
gcagaacctgtgaagaaaaagaaagtcagctacaaggatgtcgctggagcactgctgaag
gattggtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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