KEGG   Vitis vinifera (wine grape): 100258507
Entry
100258507         CDS       T01084                                 
Name
(RefSeq) autophagy-related protein 8C-like
  KO
K08341  GABA(A) receptor-associated protein
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    100258507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100258507
   04121 Ubiquitin system [BR:vvi04121]
    100258507
   03029 Mitochondrial biogenesis [BR:vvi03029]
    100258507
Membrane trafficking [BR:vvi04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    100258507
Ubiquitin system [BR:vvi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   100258507
Mitochondrial biogenesis [BR:vvi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100258507
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 100258507
NCBI-ProteinID: XP_002268684
UniProt: D7TE79
Position
12:join(5533674..5533710,5535273..5535328,5535413..5535465,5535962..5536080,5536179..5536279)
AA seq 121 aa
MAKISFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLTPEKAIFIFIKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGSLI
M
NT seq 366 nt   +upstreamnt  +downstreamnt
atggccaaaatctcattcaagatggagcaccctctcgaaaggaggcaggcagaagctgct
cgcatcagagagaagtatccggacagaataccagtgattgtggaaagggctgaaaagagt
gacattcctgacattgataagaaaaaatacctggttcctgcggatctgactgttggccag
tttgtttatgttgtccggaagaggattaagctcactcctgagaaggcgatattcattttt
atcaagaacattctgccgccaactgcggctatgatgtctgcaatttatgaggaaaacaag
gatgaagatggttttctctacatgacctacagtggggagaacacatttggttcacttata
atgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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