KEGG T01084: 100264262

Vitis vinifera (wine grape): 100264262

Entry

100264262 CDS T01084

Gene name

POLR3B

Definition

polymerase (RNA) III (DNA directed) polypeptide B

Orthology

K03021

DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi00230	Purine metabolism
vvi00240	Pyrimidine metabolism
vvi01100	Metabolic pathways
vvi03020	RNA polymerase

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:vvi00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:vvi00240]
Genetic Information Processing; Transcription; RNA polymerase [PATH:vvi03020]

SSDB

Motif

Pfam:

RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5

Other DBs

NCBI-GI:

225464023

NCBI-GeneID:

100264262

Position

AA seq 1142 aa
MRRMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRI
VSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQ
KTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQE
QLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKA
MGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLE
KEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLE
LSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTL
STGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGML
CPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLI
IFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIA
DKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEI
EPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPL
LTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVN
QRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLIS
PVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSR
HGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY
GSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM
VLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPF
EVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLT
EA

NT seq 3429 nt +upstreamnt +downstreamnt
atgagaaggatgtctatccacaagcattttcctgctgatcctgtcaaacaagctgtggac
aagttccctctccttcctgagtttttaaaggtgagaggactggtgaagcaacatttggat
tcatttaattactttgttaaaaccgacataaagaagattgttcgtgctaatgatcgcata
gtatcaagtgtggacccaagtatttatctgaggtttaaagatgtccgaattggtgaacca
tcaataacagtggatggtatcagtgaaaaacttaatcctcatacctgtcggctatctgac
atgacgtatgctgctccaatattggttaatatagagtatattacagggagtcatgttcaa
aaaaccagagtggagaagaatgatgttgttattggaagaatgcctatcatgttacggagc
tgttgctgtgttttatataaaaaggatgaagctgaacttgcaagactcggtgaatgtccc
cttgatcctggaggatattttgttgtaaaaggaaccgagaaggtgatcttaatacaagaa
caactctcgaagaacagaataatcattgacactgataagaaggggaacataaatgcatct
gttacaagcagcaccgagtcaacaaaaagcaaaacagttattgtcatggagaaagaaaag
atatggttgcaacttaatcagtttacatcaaagattccaattatgatagtgatgaaggcc
atgggaatggagagtgatcaagaggtggtgcagatggttgggagaaatcctcgatatagt
gccctacttttgccttctatggaggaatgtgcgagtcatggtatatacacccaacagcaa
gctttggaattccttgagaggaaggtgaaaaagttgccgttttataacccttcacttgaa
aaggaaggaagaggaatggctatcctacgtgatacatttattgctaatgttccggtacgt
cagaataactttcgtccaaagtgtttgtatgttgcggtgatgttaagacgtatgatggat
gctattttaaataaggacgcaatggatgacaaggattatgtagggaacaagcggttggag
ttgtctggccagttgatttctctgctctttgaggatttgttcaagacgatgattagtgag
gtcaagaagacgatagatgccatccttgcaaagcctagccgctctagccggtttgacttt
tctcaatgtcttagattcatagtgagagatagtattactgttggcctagagaggaccctt
tctactggcaactgggatgtcaagcggttcaggatgcacagaaagggcatgtcacaggtg
gtagctaggttatcttatatagggtcattggggcacatgacaaaaatctccccacaattt
gaaaagtcgagaaaagtaagtggacctagagcattgcaacctagccagtggggtatgctc
tgcccatgtgatactcccgaaggtgaagcttgtggactggtaaaaaacttggccctgatg
actcatgtaacaactgatgaagaagagagtccactaatatctctgtgttactctttgggt
gttgaagacttggaactactttctggcgaagagcttcatacaccaaattcttttctgatt
atatttaatgggctcattcttggcaagcataggaggccccagcgttttgctaatgcattg
aggaagttacggagagctggtaaaattggggagtttgtaagcgtttttgtaaatgagaag
cagcattgtgtttacattgcttctgatggaggtcgagtttgtcgtccagttgttattgct
gacaagggcaaatcgcgaatcaaggaacaccatatgaaggaattgattgatggagttcgc
acttttgatgattttttacgtgatggattgatcgagtatcttgatgtcaatgaggagaac
aatgctttgattgctctatatgaagctgatgctaaaccagaaacgactcatattgaaata
gagcctttcaccatcttaggtgtttgtgctgggttgattccttttcctcatcataatcag
tccccaagaaatacctaccagtgtgcaatgggaaagcaagctatggggaatatcgcatat
aaccagctatgtcggatggactcattactgtacttactagtgtatcctcagcggccattg
ttgacaacaagaacaattgagctggtaggatatgataagcttggagcggggcagaatgca
acagttgctgtaatgagttacagtggctatgacatagaagatgcaatagtcatgaacaag
tcatccttagatcgtggttttggtcgttgtattgtaatgaaaaagttttctgctgtcaat
caaaggtatgagaataatgcatcagacagaatagttagacccctgaaagtgggacatgat
gcagaaaggatgcagatattggatgatgatggacttgctgcccctggagaaataattaaa
ccgaacgatatctatatcaataaagagtcccctatcattacaaagggtccattaatatct
cctgtgggattaccagatagtgcatataaacccagtagacagacattcaagggtcctgaa
ggggaggcatctgtggtggatagagtagcactctgttctgataagaatagcaatctgtgc
attaaatttctaattcggcatactcgtaggccagaggttggagacaaattcagtagtagg
catgggcaaaaaggtgtttgtggcacgattattcaacaagaggatttcccattttctgaa
cgtggcatttgccctgatttaattatgaatcctcatggatttccgagtcgaatgacagtg
gggaagatgatagagcttcttggaggtaaagccggagtttcatgtggtaggtttcattat
ggcagtgcctttggagagccaagtggtcatgcagacaaagtcgagactataagtaaaacc
ctcgtgaagcatggctttagctacagtggcaaggacttcatttattcaggtatcacaggc
tgtccactacaagcatatattttcatgggaccaatttactaccaaaagttgaaacacatg
gtcctagataaaatgcatgctcgaggtagtggtccccgtgtcatgctaacgagacaaccc
acagaagggagagctcgaaatggaggactacgggttggagaaatggaaagagattgtttg
attgcttatggtgcaagcatgctgatttttgaacgattaatggtatctagtgatcctttc
gaagttcaggtttgcagggtgtgtggcttactaggatattacaatcataagctgaaaatt
ggcatttgttctacttgtaaaaatggggataatatttctaccatgaaacttccctatgca
tgcaagcttttattccaggagcttcaagcaatgaatgttgtccctcgcttaaaactgact
gaggcatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system