KEGG   Vitis vinifera (wine grape): 100264410
Entry
100264410         CDS       T01084                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 25
  KO
K12189  ESCRT-II complex subunit VPS25
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100264410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100264410
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vvi04147]
    100264410
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    100264410
Exosome [BR:vvi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100264410
  Exosomal proteins of colorectal cancer cells
   100264410
SSDB
Motif
Pfam: ESCRT-II GntR
Other DBs
NCBI-GeneID: 100264410
NCBI-ProteinID: XP_002275856
UniProt: D7TTP1
Position
2:complement(join(11397267..11397388,11399712..11399787,11400652..11400740,11400858..11400911,11406754..11406893,11408173..11408231))
AA seq 179 aa
MQKLGDLKLPNFFNYPPYFTLQPVRDTREKQVQLWKELILDYCRTQKIFVIGLEEEFPLF
SNPVIERTLSHEAKEAFLSALVAEGRAEWMDKGHKKCLILWHRIQDWADLILRFVRENGL
EDSVMTVEEIRSGTESRGTELHGMDRTVLMRALKQLEHKGKLAIFKGTSADDEGVKFSL
NT seq 540 nt   +upstreamnt  +downstreamnt
atgcagaaattgggtgacttgaagctacccaacttcttcaattatccaccatacttcact
ttgcagccggtaagggatacccgagagaagcaggtacaactttggaaggaacttattctc
gactattgtagaactcaaaagatatttgtaattggactggaagaagaatttcctctgttc
tcgaatcctgttattgaaagaaccctcagtcatgaagctaaggaggcattcctctcagcc
ttagttgcagaaggacgtgctgagtggatggataaagggcataaaaaatgtctcattctc
tggcaccggattcaagattgggctgaccttattctgcgctttgtgagagaaaatggattg
gaggacagtgttatgacagttgaggaaatacgttcagggactgaatctcgaggaacagag
cttcatgggatggaccggacagttctaatgcgagccctgaaacagctagagcacaagggt
aagcttgctatcttcaagggaacttcagctgatgatgagggcgtgaaattctctctataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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