KEGG   Vitis vinifera (wine grape): 100267297
Entry
100267297         CDS       T01084                                 
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    100267297
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:vvi04040]
    100267297
Ion channels [BR:vvi04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   100267297
SSDB
Motif
Pfam: Ion_trans cNMP_binding
Other DBs
NCBI-GeneID: 100267297
NCBI-ProteinID: XP_002268992
UniProt: E0CUJ3
Position
16:complement(join(24470964..24471662,24472525..24472761,24473428..24473539,24475338..24475615,24476556..24476768,24477507..24478068,24478693..24478721))
AA seq 709 aa
MNYRQEKFVRFQDWSSERSSEGKIPINNGVRSGKIRLAINSVSGKFQRGLECGSERINSI
RRSLKSFSFRRNLEKGSGKKILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYIPVIDKLK
KCLSLDESLQITASVLRSFTDIFYILHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIARRY
LSSYFLIDILAVLPLPQVVIWIIIPKLGGSKYMNTKRLLKFVVFFQYIPRVLRVRPLYKE
VTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFAIDRETTCWTKACGNDTSCIDSS
LYCKGTVNTTLFNASCPVIEPNTTVFDFGILLDALQSGVVESTDFPQKFFYCFWWGLQNL
SSLGQNLKTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTIRLEEMRVKRRDAEQ
WMSHRLLPESLRERIRRYEQYKWQETRGVDEQNLLINLPKDLRRDIKRHLCLALLRRVPM
FEKMDEQLMDAMCDRLKPALYTEDSYIVREGDPVDEMLFVMRGKLSTMTTNGGRTGFLNS
DYLKAGDFCGEELLTWALDPHSTSNLPISTRTVLALSEVEAFALMADDLKFVASQFRRLH
SKQLRHTFRLYSHQWRTWAACFIQAAWRRYWRKKLEESLREEEDRLQDALAKAGGSSPSL
GATIYASRFAANALRALRRNKTRKARLPERISPILLQKPAEPDFTAEDQ
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgaactaccgacaagagaagtttgtgaggttccaggattggagttcagagagaagtagt
gaagggaaaattcccataaacaatggagtaagatcagggaaaatcagactagcaataaac
tcagtttcagggaagttccagagaggtttggaatgtggttctgaacggattaacagcatt
agaaggtcattgaaatccttttctttcagaagaaatctggaaaagggttccggaaagaaa
attcttgatccacaggggccattcctccaaaagtggaataagatattcgttctatcatgc
attattgcagtctccctagatcctttgttcttttacatcccagtgattgataaattaaag
aaatgcctttcgttggacgaatcattgcagattacagccagtgttttgcgttccttcacc
gatatcttttatatactccatattatttttcaatttcgaactggttttattgctccttct
tctcgagtatttggaagaggtgttctagtagaagattcttgggcaatagcaaggagatat
ttgtcctcgtacttcctaatcgacatcctcgctgttcttcccctcccacaggtggtaatt
tggattatcattcccaaactaggaggctcaaaatacatgaatacaaagaggctgttgaaa
tttgttgtcttcttccaatacataccacgggtgctccgagttcgtccgttatacaaagaa
gtcacaagaacttctggcatactcactgaaactgcatgggctggagctgcattcaatctc
tttctttacatgcttgcgagtcatgtacttggagctttttggtacttgtttgctatagat
cgcgaaactacatgctggacaaaagcttgtggaaatgatacttcatgcattgatagttct
ctatattgtaaaggaacagtgaatacaacactttttaacgcttcatgtcctgtaatagaa
ccaaatacaacggtttttgattttggaatattacttgacgcccttcagtctggtgttgtg
gagtcaacagattttccacagaagttcttttactgtttttggtggggcctgcaaaatctg
agttctcttggtcaaaacctcaaaacaagcacctatgtctgggaaatttgctttgcagtg
ttcatttccatctctggcttggttttattttcatttcttattggaaatatgcagacatat
ctgcagtccacaaccataagattggaggagatgagagtgaaaaggcgagatgcagaacag
tggatgtctcatcgcctgcttcctgagagtctgagggagcgaatcagaaggtatgaacag
tacaagtggcaagaaaccagaggtgttgacgaacagaatctactcattaatcttcccaag
gaccttagaagggacataaaacgccatctctgcttggctctgctcaggagagtgccaatg
ttcgaaaagatggatgagcaactgatggatgcaatgtgtgaccgtctcaagccagcactg
tacacagaagatagctacatcgtccgggagggggacccagtcgatgagatgctctttgtc
atgcgaggcaagctatccaccatgacaaccaatggtggaaggactggcttcttgaactct
gattatctgaaagccggtgacttctgtggagaagaacttctcacatgggcactggacccc
cactcaacatcaaaccttcccatttcaaccagaaccgtcctagccctctccgaagttgaa
gcctttgctctaatggctgacgacctgaagtttgttgcctcccaattccgaagactccac
agcaagcagctccgccacaccttcaggctctactcccaccagtggaggacttgggctgcc
tgtttcatacaagccgcctggcgccgctactggaggaagaagctggaagagtcccttcgg
gaagaggaggataggttgcaggacgcattggccaaggcaggtgggagctcacctagtcta
ggtgccaccatttatgcatcccgattcgcagccaatgctctccgtgctttgcggcgtaac
aagacacgaaaagcaaggttgccagagagaatatcaccgatactgcttcagaaaccggcg
gagccggattttactgctgaagatcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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