KEGG T03294: VV93

Vibrio vulnificus 93U204: VV93_v1c17590

Entry

VV93_v1c17590     CDS       T03294

Name

(GenBank) ATP-dependent RNA helicase HrpA

K03578

ATP-dependent helicase HrpA [EC:5.6.2.6]

Organism

vvl Vibrio vulnificus 93U204

Brite

KEGG Orthology (KO) [BR:vvl00001]
09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    VV93_v1c17590
Enzymes [BR:vvl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     VV93_v1c17590

SSDB

Motif

Pfam:

DUF3418 OB_NTP_bind HA2_C Helicase_C DEAD AAA_19 HA2_N AAA_22 ResIII T2SSE nSTAND3 NACHT SLFN-g3_helicase AAA_30 PhoH Zeta_toxin TsaE AAA_25 NTPase_1 AAA_16

Other DBs

NCBI-ProteinID:

AIL70845

Position

I:complement(1918934..1922866)

AA seq 1310 aa
MTSSQPNTESHASEQKAQANSAASLRKALSQCLIKDRFRLSKRIAGASKINKESARNAVF
DEIALDIAKSMMEVEQRSRYQPKIEYPEILPVSQKKDDIADAIAHHQVVIVAGETGSGKT
TQLPKICAELGRGKFGLIGHTQPRRLAARSVANRIAEEMETQLGDFVGYKVRFNDQISEN
TQIKLMTDGILLAEIQHDRFLNQYDTIIIDEAHERSLNIDFILGYLKELLPRRPDLKVII
TSATIDPERFSNHFGGAPIIEVSGRTYPVETRYRPLGGETEDDRDQLEGIFDAVDELCDE
GLGDILIFMNGEREIRDTADALAKRKLKDTEIVPLYARLSAGEQNKIFQPHTGRRIVLAT
NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVQEGIC
IRLYSEDDFNSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNILDGVRL
LEELGAINSNAKDPKKRLTAVGKQLARLPIDPRLARMVLEAPRFGCLKEVMIIAAALSIQ
DPRERPSDKQQSADDKHRRFYHEDSDFLTFVNLWNHIQKQQKALSGNQFRRQCKDDYLNY
LRVREWQDVYFQIHQSMREMEFKLNSEPGSYDAVHSAILTGLLSHIGMKDQEKNEYHGAR
NARFHIFPGSGLFKKQPKWVMSAELVETSKLWGRIIAKIQPEWIEPLAKHLIKRSHSEPH
WSKKQAAVMAYEKVMLYGIPIVPKRLVNYGNIDASVSREIFIRSALVEGDWETKHAFFKQ
NRKLLLEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDTWWKQASKKEPELL
NFEKEMLFKGDASHVTDLDYPNFWHQNGLKLKLSYQFEPGDDSDGVTVHIPLPILNQIDP
AGFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLSRVTAMEMPLLDALEKELR
RMTGATVLREDWKLDQVPDHLKVTFRAVDERNRKLKEHKDLHELKESLKEKVQETLSKVA
DDDIEQQGLHTWSFGELPQVYQQKRGGYQVKAFPALVDNKDSVEIKLYETEQEQISAMKA
GQRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEDQGGLV
WEPEKFEALKEHVRAELGDTVVDIAKQVETILTTAFNINKKLKGKIDFTMAFALSDIKAQ
IEGLIFKGFATECGWKRLPDILRYMKAIERRMEKLPIDPNKDRLHMLKIESVVKDYKELL
NKIPKGLAVPENVKEIRWMIEELRVSFFAQQLGTPYPVSDKRVKNAIEAC

NT seq 3933 nt +upstreamnt +downstreamnt
ttgacttcgtcacagccaaatacagaatcccatgcttctgagcaaaaggctcaagcaaac
agcgccgcgtcattacgcaaggcgctcagtcagtgtttgatcaaagatcgctttcgcctg
agtaagcgcatcgcaggtgccagtaaaattaataaagaatcggcacgcaacgcggtgttt
gatgagatcgcactggacatcgccaaatccatgatggaagtggaacagcgcagccgctat
caaccgaaaattgagtacccagaaatcctgcctgttagtcagaagaaagatgacattgca
gacgccattgctcatcaccaagtggtgattgtggcgggtgaaactggctcaggtaaaacc
actcagctaccaaaaatctgcgccgaattaggccgtggtaagtttggtttgattggccat
actcagccacgccgcttagcggcacgctcggtggccaatcgcattgccgaagagatggaa
acgcaactgggggattttgtcggttacaaagttcgatttaacgatcaaatctccgaaaat
acccaaattaaattgatgacagacggtatcttgctggccgagatccaacacgaccgtttc
ctcaatcaatatgacaccatcatcatagatgaagcgcacgagcgcagcctgaatatcgat
tttatcttgggttatttgaaagagttactgccacgtcgtcctgatctgaaagtcatcatc
acgtcggcaaccattgacccagagcgattctccaaccactttggcggcgcgccgatcatt
gaagtgtcgggacggacttatcctgtggaaacgcgctaccgtccgttaggtggcgaaacc
gaagacgatcgtgaccaacttgaaggcatctttgacgcggttgacgagctgtgcgacgaa
ggcttgggcgacattcttatcttcatgaatggtgagcgtgaaattcgcgataccgcagat
gcgctggccaaacgtaagctcaaagatacggagattgtgccgctctacgcgcgcctttcc
gcgggcgagcaaaataaaatcttccagccgcatactggccgccgtattgtcttggcgacc
aacgttgctgaaacctcgttaaccgtgccgggcatcaagtacgtgattgaccctggtacc
gcgcgtattagccgctacagctaccgtaccaaagtacaacgtctgcccattgagccggtt
tctcaagccagtgccaaccagcgaaaaggtcgttgtggtcgtgtgcaagaaggtatctgt
attcgtctctactctgaggacgatttcaattcgcgtccggagtttaccgatcctgaaatt
ctgcgcaccaacttagcgtcggttatcttacagatgaccgcgctgggccttggcgatatt
gaagcattcccatttgttgaagcgccagataaacgcaatattcttgatggtgtgcgcttg
cttgaagagttgggcgccatcaacagcaacgccaaagatccgaaaaaacgcctcaccgcg
gtgggcaagcagttggctcgtttgccaattgaccctcgcttagcgcgcatggtgttggaa
gcgccaagatttggttgtttgaaagaagtcatgatcattgcagcggccttgtcgattcaa
gatccgcgtgagcgaccgtcagacaaacagcaatcggcagatgataagcatcgtcgcttc
taccatgaagattctgatttcctcacctttgtcaatttgtggaatcacattcagaagcaa
caaaaagccttgtcgggcaatcagttccgtcgtcagtgcaaagacgattacctcaactac
ttgcgtgtgcgtgagtggcaagatgtttacttccaaatccatcaatcgatgcgtgagatg
gagttcaagctcaatagtgaacccggttcttacgatgcggtgcacagcgcgattttgact
ggcctgttatcgcatattgggatgaaagatcaggagaaaaatgagtatcacggcgcacgc
aatgcccgtttccatattttccctggctctggtctgtttaagaaacagccaaagtgggtg
atgtcggcagagctggtcgaaacctcgaaactgtggggccgaattattgccaagattcaa
ccggaatggattgaaccactggcgaagcatttgattaagcgtagccacagcgagccccat
tggtcgaagaaacaagcggccgtgatggcgtacgaaaaagtgatgctctatggcattccg
attgtgcctaagcgcttggtgaattatggcaatatcgatgcgtcagtgagccgtgagatc
ttcattcgcagtgcgctggtggaaggggattgggaaaccaaacacgcgttcttcaaacaa
aaccgtaaattgctgctcgaagtggaagagctggagcacaaatctcgtcgtcgcgatatt
ttggtcgacgatgaagagctgttccaattttacgatcaacgcgtcggcacggaagtggtc
tctggacgccatttcgacacctggtggaagcaagcatcgaagaaagagcctgaactgctg
aactttgaaaaagagatgttgttcaaaggcgatgcaagccacgtgacggatttggattac
ccgaatttctggcatcagaatggcttgaaactcaagttgagctaccagtttgagccgggg
gatgacagcgacggcgtcacggtgcacattccattgccgattttgaaccaaatcgatccg
gcgggcttcgattggcaaatcccgggcttgcgtcatgaattggtggtgagcttgattaag
tcgctaccgaagacgctgcgcaaaaactttgtgcctgcaccaaattatgccgatgcattc
ctatctcgcgttactgcaatggaaatgccgttgctcgatgctttagagaaagagctacgc
cgcatgaccggggcgacggtgctgcgtgaagattggaaactggatcaagttcctgaccat
ctgaaagtgactttccgtgcggttgatgaaagaaatcgtaaactgaaagagcacaaagat
cttcatgagttaaaagaaagcctaaaagagaaggtgcaagaaaccttatcgaaagtggcg
gatgacgacatcgagcaacaaggcttacacacatggagctttggcgagttgccacaggta
tatcagcagaaacgtggtggttatcaggttaaggcgttccctgcgctggtcgacaacaaa
gacagcgtagaaatcaagctctacgaaaccgagcaagagcagatcagtgcaatgaaagcc
ggtcaacgccgtttgatcttgttgaatgtgccatcgccgattaagtatctgcatgcgaac
ttgccgaacaaatcgaagctgggcctgtactttaacccgtacggcaaagtgcttgatttg
atcgacgactgcattgcttgtggcgttgacaagctgattgaagatcagggcggcttagtt
tgggagccagaaaaatttgaagcgttgaaggaacacgtgcgcgcagaattgggcgacacg
gtggtggatatcgccaagcaagtggaaacgattttgaccacggccttcaacatcaacaaa
aagctcaaaggtaagattgatttcaccatggcatttgctctgtcggacatcaaagcgcaa
atcgaaggtctgatcttcaaaggctttgccacggaatgtggttggaaacgactgccagac
atcttgcgttacatgaaagcgattgagcgtcgaatggaaaaactgcctatcgacccgaac
aaagatcgcttacatatgttgaagattgagtcggtagtcaaagactacaaagagctattg
aacaagattccgaaaggattagcggtaccggaaaatgtgaaagagattcgttggatgatc
gaggagctgcgagtcagtttcttcgctcagcagctcggaacaccttatccggtctccgat
aaacgagtaaaaaacgctatagaagcttgctaa

All links

Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (26)   

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