KEGG   Vibrio vulnificus MO6-24/O: VVMO6_03643
Entry
VVMO6_03643       CDS       T01415                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
vvm  Vibrio vulnificus MO6-24/O
Brite
KEGG Orthology (KO) [BR:vvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvm03016]
    VVMO6_03643
Enzymes [BR:vvm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     VVMO6_03643
Transfer RNA biogenesis [BR:vvm03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    VVMO6_03643
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 DUF2274
Other DBs
NCBI-ProteinID: ADV88665
Position
II:complement(760888..762882)
AA seq 664 aa
MFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSKTSFFIPPAYMKKCMHGDKV
IAIIRTENEREVAEPQELVEQMLNRFIGRVKMFKGKLNVVPDHPQLKKMSLKAKTKKGLN
PQEFAEGDWVVGHLIRHPLKDDNGFFVEISEKITDADDKIAPWWVTLAENDLPNSEPAGI
DDWQIKDDADLERIDMTHIPFVTIDGESTKDMDDALYAKKNDAGDFELTIAIADPTAYIT
PDDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIEGEIRPALCCTVTVSKDGVIGD
DIQFFAANIKSHARLAYDNVSDWLETGSCEKWQPSEEIAAIVRDLYEFSQARAEWREKNA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAGKTLQAHFGTGVFNC
HAGFKPEKIADVVELVNPEGTLEFTAESIATREGFAALRRWLSKQETTYLDNRIRKFQTY
SEVSNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKALILNKEPVQKPDDSVGEELAL
HRKHHKIAERNVADWLYARTLADAPENQTLFTGEIFDINRAGMRIRLLENGAAAFIPGSL
IIDNKERIECNGDLGTVSIDKEVVYKLGDVLEVVLADVNQENRSLVAKPTQVFAELPVVE
ETQN
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccacttttagcccagcttaagcaacaaattcaggaaaatctgcca
aagaaagaaggcacgattaaagcaaccgaaaaaggttttggctttctcgaagtcgatagc
aagacaagtttctttattccaccagcctacatgaagaaatgtatgcacggtgataaggtg
atcgccattatccgcaccgaaaacgaacgagaagttgccgagccacaagagcttgttgag
cagatgctaaatcgcttcatcggtcgtgtgaaaatgttcaaaggcaaattgaatgttgtt
cctgatcatccgcaactgaagaagatgtctctcaaagccaaaacgaagaaaggtctaaac
cctcaagaatttgctgaaggcgactgggttgtcggccatttgatccgtcacccactaaaa
gatgacaacggtttcttcgtggaaatcagcgaaaaaattaccgatgccgatgacaagatc
gcaccttggtgggtaacgctggcggaaaacgacctgcctaactctgagcctgccggtatc
gacgattggcaaattaaagacgatgcggatcttgaacgtatcgacatgacacatatccct
tttgtgaccatcgatggtgagtcaacaaaagacatggacgatgcgctttacgcgaagaaa
aacgacgctggcgattttgaattgacgattgccattgccgatccaaccgcttacatcaca
ccagatgatgaaatggacaaggttgcacgtgagcgcggctttaccatttatcttccagga
cgcaatatcccgatgttgcctcgtgaccttgctgatgaactgtgttcgctaatcgaaggt
gaaatccgccctgccctttgctgcacagtgaccgtcagtaaagacggcgtgattggcgat
gatatccagttctttgcggcaaacatcaagtcgcacgcccgtttggcgtatgacaatgtc
tccgactggctcgaaacaggcagctgtgaaaaatggcagccaagcgaagaaattgcggcc
atcgtgcgtgacctgtatgaattctcacaagctcgcgcagaatggcgagagaagaatgcg
gtagtcttcccagatcgtcctgattaccgttttgagttgagtgaagataacgatgtcgtt
gcgattcacgcagacatgcgccgtagcgcaaaccgcttggttgaagagtcgatgatcaca
gccaacatttgcgcgggtaaaacgctgcaagcccatttcggcactggcgtatttaactgc
catgcaggcttcaaaccagagaagattgccgatgtagtggagctggttaacccagaaggt
acgttggagttcacggctgagtcgattgccactcgtgagggttttgctgcactacgccgc
tggttaagcaaacaagaaacgacttatcttgataaccgcattcgcaaattccaaacctac
agtgaagtgagcaaccagcctttgccacactatgcgatgggccttgatatctacgcaact
tggacgtctccaattcgtaaatatggcgatatgatcaaccatcgtatgcttaaggcttta
attctaaacaaagagcctgtgcaaaaaccggatgatagtgtcggcgaagagcttgctcta
caccgcaagcatcacaagattgcagaacgtaatgttgcagactggctgtatgctcgcact
ctagcagacgctccagaaaatcaaacgctgtttaccggtgaaatcttcgatattaaccgt
gctggtatgcgcatccgtttacttgaaaatggcgctgcggcattcatccctggttctctt
attattgataataaagaaagaattgagtgcaatggtgacctaggtactgtttctatcgat
aaagaagtggtatacaaactgggagacgttcttgaagtcgtgttagctgacgttaaccag
gagaacagaagcctggttgcgaaacctacccaagtattcgctgaattacccgtggtagaa
gaaactcagaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system