KEGG T00108: VV1

Vibrio vulnificus CMCP6: VV1_1612

Entry

VV1_1612 CDS T00108

Gene name

ffh

Definition

signal recognition particle protein

Orthology

K03106

signal recognition particle subunit SRP54

Organism

vvu Vibrio vulnificus CMCP6

Pathway

vvu03060	Protein export
vvu03070	Bacterial secretion system

Module

vvu_M00335

Sec (secretion) system

Class

Genetic Information Processing; Folding, sorting and degradation; Protein export [PATH:vvu03060]
Environmental Information Processing; Membrane transport; Bacterial secretion system [PATH:vvu03070]

SSDB

Motif

Pfam:

SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin cobW AAA_22 AAA_31 KTI12 AAA_16 AAA_30 AAA_33 Helicase_RecD DUF2075 T2SE AAA_19 Mg_chelatase MobB APS_kinase ATP_bind_1 AAA_17

Other DBs

NCBI-GI:

326423856

NCBI-GeneID:

1178529

UniProt:

Q8DC35

Position

I:1584766..1586142

AA seq 458 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVREFVARVKEKAV
GVEVSKSLTPGQEFIKIVQGELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASDIGVDFFPSSADQKPIDIANAAIDHAK
KKFFDVLIVDTAGRLAIDEAMMGEIQQLHSAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDTEKAQKLAQKFKEKKGFDLEDFREQLGQMQNMGGMMGMLDKLPGMSQL
PSDIKDKVDDKMFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGIKGMMRNMQGMMGGMGGGFNPFGR

NT seq 1377 nt +upstreamnt +downstreamnt
atgtttgagaatttaacggatcgattatccaaaacgctgaagaatatcagtggcaaaggt
cgtctgacagaagacaatatcaaagataccctgcgtgaagtacgaatggcactgcttgag
gccgatgttgccttacctgtggtgcgtgaatttgtcgctcgcgtaaaagaaaaagccgtt
ggtgtggaagtgtcgaaatcactcactcccggtcaagagttcattaagatcgttcaaggt
gaacttgaagcggtcatgggtgaatcgaatgaagcgctaaacttagcggcgcaaccgcca
gcggttattttgatggcgggtctacaaggtgcgggtaaaaccacctcagtcggtaaacta
tcgaagctgctaaaagagcgcgataagaagaaagtgttggttgtatcagccgacgtttac
cgtccagcggcaatcaaacagttagaaacattggcgagcgacattggtgttgacttcttc
ccttcttctgctgaccaaaagccgattgatatcgccaatgccgctatcgaccacgcgaaa
aagaaattctttgatgttttgatcgtcgataccgcaggtcgcttagcgattgatgaagcg
atgatgggcgagatccaacaacttcatagtgcaattaacccagtggaaacgctgtttgtt
gttgatgccatgacgggtcaagatgccgccaataccgccaaagcttttggtgacgctctg
ccactgacgggggtcattctgaccaaagtggatggcgatgcgcgtggtggtgctgcgctg
tcggtacgtcatattacaggtaaaccaatcaaattcttaggtgtgggtgaaaagaccgac
gcacttgagccattccatcctgatcgtgttgcttcacgtattctgggcatgggggatgtt
ctgtcgctgattgaagatctgcaacgcaacgttgataccgaaaaagcgcagaaactggcg
caaaagttcaaagagaaaaaaggctttgatcttgaagatttccgtgaacaacttggtcag
atgcagaacatggggggcatgatggggatgctggataagctacctggtatgtctcaattg
ccgtcggacatcaaagataaagtcgacgacaagatgttcaaacagatggaagcgatcatc
aactccatgacgatgaaagagcgccaaaacccagatttgattaaaggttcacgtaaaaag
cgtatcgctgctggttctggcacccaagtgcaagatgtgaatcgcctgttgaagcagttt
acccaaatgcaaaagatgatgaagaaaatgcagaagggtggcatcaaaggcatgatgcgc
aatatgcaaggcatgatgggtggtatgggcggtggattcaatccattcggccgataa

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (31)   

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