KEGG T00108: VV1

Vibrio vulnificus CMCP6: VV1_2657

Entry

VV1_2657 CDS T00108

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

vvu Vibrio vulnificus CMCP6

Pathway

vvu03410	Base excision repair
vvu03420	Nucleotide excision repair
vvu03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:vvu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:vvu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:vvu03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

326424055

NCBI-GeneID:

1179505

UniProt:

Q8D9E6

Position

I:complement(2702213..2703055)

AA seq 280 aa
MRLTILSMAILVAIPVMAEEEPLPIPEVMLAQTYGHGVKINDYWYSEKLDGIRAYWTGTQ
LLTRNGNRIYAPTWFIEALPPMALDGELWAGRGNFHIVQQTVLDATPDEHAWKQIDFMVF
DLPESAGDYQKRYYTLIDLVKNIDARHIKFVEHKPIVSEAQLFEKLDAITGISGEGVMLR
NITSRYQAGRGNDLLKLKKYSDAEATVIGYKPGSGRLMGMLGALLVRLDDGTEFYIGSGF
TDEQRKNPPAIGATVTYRHNGFTNSGKPKFARYLRERLPE

NT seq 843 nt +upstreamnt +downstreamnt
atgcgtttgactatattatcgatggcgattctcgtcgccatccctgtgatggctgaggaa
gagccattgccaataccagaggtgatgcttgcacaaacttatgggcatggagtgaagatc
aacgattattggtatagcgaaaaattggatggtattcgggcgtattggactggcactcaa
ttgcttactcgcaatggcaatcgaatttatgctccgacgtggtttattgaagcattacca
ccgatggcgctcgatggtgagttatgggccggacgaggtaattttcacattgtgcagcag
acagtgctggacgccacgcccgatgagcatgcttggaagcagattgactttatggttttt
gacctgccagagtcagcgggtgattaccaaaagcgctactataccctgatcgatttagtg
aaaaacatcgacgcgaggcacatcaaatttgttgagcacaaaccgatcgtcagcgaagca
cagctttttgaaaaactggatgccattacgggcatcagtggtgaaggggtgatgcttagg
aatatcaccagccgctaccaagcggggcggggcaatgatctactgaaactgaagaagtac
agtgatgcagaagcgacggtcattggttataagccagggagtggccgtttaatgggtatg
ctaggcgcattgttggtgcggctcgatgatggtaccgagttctatatcggtagtggtttc
accgacgaacaacgcaaaaatccccctgctattggtgcgactgttacttatcgacacaat
ggtttcactaacagcggcaaacccaaatttgcccgatatctgcgagagcgtcttccagaa
taa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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