KEGG   Vibrio vulnificus CMCP6: VV1_3172
Entry
VV1_3172          CDS       T00108                                 
Symbol
menD
Name
(GenBank) 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
  KO
K02551  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
Organism
vvu  Vibrio vulnificus CMCP6
Pathway
vvu00130  Ubiquinone and other terpenoid-quinone biosynthesis
vvu01100  Metabolic pathways
vvu01110  Biosynthesis of secondary metabolites
vvu01240  Biosynthesis of cofactors
Module
vvu_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:vvu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    VV1_3172 (menD)
Enzymes [BR:vvu01000]
 2. Transferases
  2.2  Transferring aldehyde or ketonic groups
   2.2.1  Transketolases and transaldolases
    2.2.1.9  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
     VV1_3172 (menD)
SSDB
Motif
Pfam: TPP_enzyme_M_2 TPP_enzyme_N TPP_enzyme_C TPP_enzyme_M
Other DBs
NCBI-ProteinID: AAO11488
UniProt: Q8D820
Position
I:complement(3245573..3247267)
AA seq 564 aa
MNHDQAVLNRIWCETLFEELYRFGVRDVCVAPGSRSTPLALEANAHTRLKLHTHFDERGL
GFLALGLAKASQRPVAVVVTSGTAVANLLPAVAEAGLTGEKLVLLTADRPIELVGCGANQ
AIAQQGIFSNHVCASLNLPSPNTQTSLNWLLTSVDQVLHQQAVSGHAVHINCPFPEPLYS
NAPKSIYQSYIDTVDVWRAEGGIYSNKQMPLPMPPSLAEIEQRKGVVVIGSVTLQEAKQA
HQFGAQMGWPVLCDPQSGTTSDWSGFDIWLQNPAARAQLSQCDLIIQFGRRLVSKRLHQW
LEQQVQAGCDYWYVSPDFERDNQSHLPQQHFVCSIAAWLNVVTNREVQPVAWANELPRFS
AEVNKQAREIAQSSLCEMMIALHLSSLVGSADLFLGNSLFVRMVDMVGQLHGVETFTNRG
ASGIDGLFATASGVQRARSNPMLLMIGDTSALYDLNSLALYSHQETPVVIVVTNNDGGAI
FDLLPVPPQQKQALYQMPHGYRFEFAAKQFGLDYVCPTSMTELTERIVGHFAHGCGALLV
EVNTPPNQASQHIKQLADHVRSLV
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgaaccacgatcaagccgtattgaatcgtatttggtgtgaaacgctgtttgaagaattg
taccgctttggcgtacgagatgtttgtgtcgcacctggctcacgttcaaccccgctcgcc
ctcgaagcgaatgcccatacccgtttgaagttgcatacgcattttgatgagcgtggattg
ggttttcttgcacttggtttagccaaagccagccagcggcctgtggcggtggtggtgaca
tcgggcactgcggtggccaatcttttgcctgcagtggcagaggcaggcttaaccggggag
aaactggtattactgaccgcagatcgaccgatcgagctggtgggatgcggggccaatcag
gcgatcgcacagcaaggcatcttctcaaatcatgtttgtgcttcattaaacttgcccagt
ccaaacacgcagacgtcattaaactggttactgacatctgtggatcaagtgcttcatcaa
caggcggtcagtggccatgcggtgcacatcaactgtccctttcctgagccgctttattca
aatgcaccaaagtcgatttaccagagttatatcgatacggtggatgtgtggcgtgcagag
gggggcatctacagtaacaaacaaatgccgctccccatgccgccttctcttgcagaaatt
gaacaacgtaaaggcgtggtggtgattggcagtgtaacactgcaagaagccaaacaggcc
catcaatttggggcgcaaatgggatggcctgtgctgtgtgacccacaatccggaaccact
tctgattggagtggttttgatatctggttgcaaaatcctgcagctcgtgcacagctgtcc
caatgtgatttgatcatccagtttggccgtcgtttggtctcgaagcgtttacaccaatgg
ttagagcagcaagtgcaagctggctgcgattattggtacgtttcaccggattttgagcga
gacaaccagagccacctacctcaacagcattttgtctgctcaatcgcagcgtggttgaac
gtggtgaccaaccgcgaagtgcagcctgtagcgtgggcgaatgaattgccgcgttttagt
gcggaggtgaacaagcaagccagagagatcgcccaaagcagcctgtgtgaaatgatgatt
gctctgcacttatcctcacttgtgggcagcgccgatctgtttttaggcaatagcttgttt
gtgcgtatggtcgatatggttggtcaattgcatggtgtcgaaacatttaccaatcgtggc
gcctcggggattgatggtctctttgccacagcaagtggcgtgcaaagggcaagatccaac
ccaatgttattgatgattggtgacacgtctgcgttgtatgacttgaattcgctggcgctg
tatagccatcaagagactccggtggtgatcgtggtgaccaacaacgacggcggcgcgatt
tttgatttattaccggtaccaccgcagcaaaaacaagcgttataccaaatgcctcatggc
taccgtttcgaattcgccgccaaacaatttggcctcgattacgtgtgccccacatcgatg
acggagctaacagaacgaattgttggccattttgcacacggctgtggcgctttattggtt
gaagtcaacacgccgccaaaccaagcgtcacagcacataaaacaattggctgatcatgtc
cgttctctcgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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