KEGG V.vulnificus: VV2

Vibrio vulnificus CMCP6: VV2_0188

Entry

VV2_0188 CDS V.vulnificus

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway vvu00260 Glycine, serine and threonine metabolism
vvu00460 Cyanoamino acid metabolism
vvu00670 One carbon pool by folate
vvu00680 Methane metabolism
vvu01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:vvu00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:vvu00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:vvu00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:vvu00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1
PROSITE: SHMT

Other DBs NCBI-GI: 27366644
NCBI-GeneID: 1180212
UniProt: Q8D7G5

Position II:complement(209233..210528)

AA seq 431 aa
MNSHYQNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTIMGMSLDAGGHLTHGARPALSGKWFNAVQYGVDKETLEINYDDVRALAVEHKPKM
IIAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEEIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
IDNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGVRLGTPAGTSRGFGAEEFKLIGHWIGDVLDGLVENPEGNAEVEQRVRKEV
KALCSRFPLYQ

NT seq 1296 nt +upstreamnt +downstreamnt
atgaatagtcattaccaaaatcacagcttggaaaactttttctcgactaacttgtctgca
acggatgatgccgtttttgctggtattcaagccgaatttacacgtcaaaatgaacaaatc
gaattgatcgcttctgagaacatcgtgtctaaagcggtcatgcaagcgcaaggcacctgc
ctcaccaataaatacgcagaaggttacccaggtcgtcgttactacggtggttgtgaacac
gttgataccgtggaagccatcgctatcgaacgcgcgaaaaaactttttaattgcgaatac
gcaaacgttcaaccgcactctggcgctcaagccaacggcgcggtgaaactggcgctattg
caacctggcgacaccattatgggcatgtcgctcgatgcaggtggccacttaactcacggt
gcacgccctgctctttcgggcaaatggtttaacgccgttcaatacggcgttgataaagag
acgctcgaaatcaactacgatgatgttcgcgcactggcggtagaacacaaaccaaaaatg
attattgctggtggcagcgcgattcctcgcgtgattgattttgccaagttccgtgaaatc
gctgacgaagttggcgcgattttgatggtcgatatggcgcacatcgcgggtttgatcgcc
acaggcgcacaccctagcccactgcctcatgcacacgtggtgaccaccaccacacacaaa
acgctacgcggcccacgcggcggcatgatcctcaccaatcacgaagaaatcattaagaaa
atcaactctgcggtattccctggcctacaaggcggcccgctgatgcacgtgattgcagcg
aaagcagtggcgtttggcgaagcactcggccctgagttcaaaacttatatcgattcggtg
atcgataacgcaaaagttcttgctgaagtgttgcaaactcgcggttgtgacattgtgact
ggcggaacggacacgcacctaatgctggttgatcttcgtcctaagggattgaaaggtaac
aaagcagaagaagcactagagcgtgcggggatcacatgtaacaaaaatggcatcccattc
gacacagaaaaacctatgattacatcgggtgttcgtttgggcacgccagcgggtacaagc
cgaggctttggcgcagaagaattcaaattaataggtcactggattggtgatgttctcgat
gggttagttgaaaacccagagggcaacgcagaagtagaacaacgcgtgcgtaaagaagta
aaagcactctgttcacgcttcccactttaccagtaa

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (19)

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