KEGG   Vibrio vulnificus YJ016: VV0289Help
Entry
VV0289            CDS       T00150                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vvy  Vibrio vulnificus YJ016
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vvy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VV0289
Enzymes [BR:vvy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VV0289
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VV0289
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:298883..299767
Genome map
AA seq 294 aa AA seqDB search
MDCHFSFNRLFVSLLDIEHFDLGATMPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRW
VIPSELKKLQGQVIRHIGRRAKYLIIETDVGSAIVHLGMSGSLRVLDADFPAGKHDHVDL
KLSNGKVLRYNDPRRFGAWLYAAPGEDHDVLGNIGPEPLTDAFDGQYMFEKAQGKRVAVK
QFIMDNKIVVGVGNIYASESLFRSRILPTRATMSLSAEEWQRLVSHIKQTLQTAIEQGGT
TLKDFSQADGKPGYFAQELQVYGKAGESCPECGEAIQELKIGQRNTFYCSYCQC
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atggattgccatttcagtttcaaccgattatttgtttccctactagacattgagcatttt
gaccttggagccaccatgcctgaattaccagaagtggaagtgagccgaatgggcattacg
ccgcatttgctcaatcaaaccattcaatcactgattttccgtaccccaaaactgcgctgg
gtcattccaagtgagctaaaaaagctgcaagggcaagtgattcgtcatattggccgccga
gccaaatatctgatcatcgaaaccgatgtcggcagtgcgattgtgcatttaggcatgtcc
ggttcattgcgtgtgctggacgctgacttcccagctggcaaacacgatcacgtcgatctc
aaactctctaatggcaaagtgctgcgttacaacgatccacgtcgctttggtgcttggctt
tatgcagcgccaggggaagaccatgatgtgttgggtaatattggtccagagccgctaacg
gatgcttttgatgggcaatacatgtttgaaaaagcgcaaggtaaacgcgttgcggtgaag
cagtttattatggacaacaaaatcgtagtgggtgtggggaacatctatgccagcgaatct
ttgtttcgctcacgcatcctgccgaccagagcgacgatgtcactcagtgccgaggaatgg
caacgcttggtgagccacatcaagcaaaccttgcaaacggcgattgagcaaggtggcacg
acattgaaagacttttcccaagccgatggtaagccggggtattttgcccaagaattgcaa
gtgtatggaaaagccggagagtcatgcccagaatgcggcgaagcgattcaagagcttaaa
atagggcaacgcaataccttctactgttcttactgtcagtgctaa

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