KEGG V.vulnificus_YJ016: VVA0693

Vibrio vulnificus YJ016: VVA0693

Entry

VVA0693 CDS V.vulnificus_YJ016

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway vvy00260 Glycine, serine and threonine metabolism
vvy00460 Cyanoamino acid metabolism
vvy00670 One carbon pool by folate
vvy00680 Methane metabolism
vvy01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:vvy00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:vvy00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:vvy00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:vvy00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1
PROSITE: SHMT

Other DBs NCBI-GI: 37676353
NCBI-GeneID: 2622657
UniProt: Q7MEH7

Position II:complement(785122..786438)

AA seq 438 aa
MIERLSTMNSHYQNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAV
MQAQGTCLTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANG
AVKLALLQPGDTIMGMSLDAGGHLTHGARPALSGKWFNAVQYGVDKETLEINYDDVRALA
VEHKPKMIIAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHV
VTTTTHKTLRGPRGGMILTNHEEIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEF
KTYIDSVINNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITC
NKNGIPFDTEKPMITSGVRLGTPAGTSRGFGAEEFKLIGHWIGDVLDGLVENPEGNAEVE
QRVRKEVKALCSRFPLYQ

NT seq 1317 nt +upstreamnt +downstreamnt
atgattgaaaggttatctaccatgaatagtcattaccaaaatcacagcttggaaaacttt
ttctcgactaacttgtctgcaacggatgatgccgtttttgctggtattcaagccgaattt
actcgtcaaaatgaacaaatcgaattgatcgcttctgagaacatcgtgtcgaaagcggtc
atgcaagcgcaaggcacctgcctcaccaataaatatgcagaaggttacccaggccgtcgt
tactacggtggttgtgaacacgttgataccgtggaagccatcgctatcgaacgcgcgaaa
aaactttttaattgcgaatacgcaaacgttcaaccgcactctggcgctcaagccaacggc
gcggtgaaactggcgctattgcaacctggcgacaccattatgggcatgtcgctcgatgca
ggtggccacttaactcacggtgcgcgccctgctctttcgggcaaatggtttaacgccgtt
caatacggtgttgataaagagacgctcgaaatcaactacgatgatgttcgcgcactggcg
gtagaacacaaaccaaaaatgattattgctggtggtagcgcgattcctcgcgtgattgat
tttgccaagttccgtgaaatcgctgacgaagttggcgcgattttaatggttgatatggcg
cacatcgcgggtttgatcgctacaggcgcacaccctagcccactgcctcatgcacacgtg
gtgaccaccaccacacacaaaacgctacgcggaccacgcggcggcatgatcctcaccaat
cacgaagaaatcattaagaaaatcaactctgcggtattccctggcctacaaggcggcccg
ctgatgcacgtgattgcagcgaaagcggtggcgtttggcgaagcactcggccctgagttc
aaaacttatatcgattcggtgatcaataacgcaaaagttcttgctgaagtgttgcaaact
cgcggttgtgacattgtgactggcggaacggacacgcacctaatgctggttgatcttcgt
cctaagggattgaaaggcaacaaagcagaagaggcactagagcgtgcggggatcacatgt
aacaaaaatggcatcccattcgacacagaaaaacctatgattacatcgggtgttcgtttg
ggcacgccagcgggtacaagccgaggctttggcgcagaagaattcaaattaataggtcac
tggattggtgatgttctcgacgggttagttgaaaaccctgagggcaacgcggaagtagaa
caacgcgtgcgtaaagaagtaaaagcactctgttcacgcttcccactttaccagtaa

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (22)

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