KEGG   Wallemia ichthyophaga: J056_000248
Entry
J056_000248       CDS       T03457                                 
Name
(RefSeq) Eukaryotic peptide chain release factor GTP-binding subunit
  KO
K03267  peptide chain release factor subunit 3
Organism
wic  Wallemia ichthyophaga
Pathway
wic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    J056_000248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wic03019]
    J056_000248
   03012 Translation factors [BR:wic03012]
    J056_000248
Messenger RNA biogenesis [BR:wic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     J056_000248
Translation factors [BR:wic03012]
 Eukaryotic type
  Release factors
   J056_000248
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 AbiJ_NTD3
Other DBs
NCBI-GeneID: 20373200
NCBI-ProteinID: XP_009265921
UniProt: R9ARM0
Position
Unknown
AA seq 706 aa
MNPNARSFNFNPSASGFVPSWAAPPQAQQQQQQQADQQFAQGYPYGGGYPYDQQYYPQQG
YGGYPAAVPQFAPPQQEPQQPQQPARLSAKEQMEMMSGSGATKSPPVSLSLGGGGPAKPS
AKELLERKSETPAKSMSISMGGSKPKPAAAPATSEKKEAAAPAPAAAPEKPAPAPSVTEK
KDLSPAPTPSPAAASSRASAKSTDNSDSNAVSGANTPMSKSALQAAQSKTDTIVKESKAA
ADADTLKDLFGADGVQPKQHLNVVFCGHVDAGKSTMGGQLLHLTGMVDKRTLEKYERDAK
EAGRESWYLSWALDSTPQEREKGKTVEVGRAFFETEKRRYTILDAPGHKGYVPSMISGAA
QADVAVLVISARKGEFETGFEKGGQTREHVVLAKTAGVQKIIVVINKMDEPTVQWDKARY
DDIVSKLNPFLKGSGFSLKTDVTYIPVSAYSGDNIKDKVSKPEAEWCDSPALIPFLDSMP
LVDRNYSAPLMMPISEKYKDMGTMVVGKIESGTLKCGDKLTLMPNKDQVEVMTIEDELDE
PIQIALCGDNVTLKLRGVDDENVQVGFVLTDPRKPVKTVKQFEAQLAILDHKNIICAGYS
AMMHCHTLAEEVHLSELLHYYDKKTGRKSKKAPQFAKKGQKVVALLESTGSVCVESFNDY
PQLGRFTLRDEGKTVAIGKITKLIEKTESGELADVSTGVQQLSVNK
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgaacccaaacgcgagatcgttcaattttaacccttcagcttctggtttcgtcccttca
tgggctgctcctcctcaagcacagcagcaacagcaacagcaggcagaccagcaatttgca
cagggctatccatacggaggtggatatccatacgatcagcaatactatccacagcaagga
tacggcggatatccagcagctgtaccccaattcgctccaccacagcaggaacctcaacag
cctcaacagccagctagattatcagcaaaggagcaaatggagatgatgtcaggctctggt
gcaacgaagagccctccagtatcactctcactcggcggcggtggtcctgccaaaccatcc
gcaaaggaattattggaacgcaagtcagaaacacctgcgaaatctatgtcaattagcatg
ggtggctcaaaaccaaagcctgcagcagctccagcgacttcggagaagaaggaagcagca
gcacctgcacctgcagctgcaccagaaaagccagccccagctccatcagttactgagaaa
aaggatctttctccagcgccaacgccttcacctgcagccgcttcatctagggcttctgca
aaatcgaccgataactcagattcaaatgcagtaagcggagcaaacacaccaatgtccaag
tctgcactccaagcggcgcaaagcaagactgacactattgtcaaagagtcaaaggcagca
gctgatgcagacacactcaaggatcttttcggtgcagatggtgtacagccaaaacaacat
cttaacgttgtgttttgtggtcacgtcgacgctggaaagtcaacaatgggcggtcaattg
ttacacttaactggtatggtcgacaagcgtacactggaaaagtatgagagggatgctaaa
gaagctggtagagagtcgtggtatttgagttgggcattggactcaactcctcaggaaaga
gaaaagggtaagactgttgaagttggtagagcatttttcgagactgagaagagaagatat
acaattttggatgcaccaggacacaagggttacgttccatcaatgatttcaggcgctgct
caagctgatgtcgctgttttggttatttccgccagaaagggtgaatttgaaactgggttc
gaaaagggtggtcaaactagagagcacgtcgttcttgctaagactgcaggtgttcagaag
attattgtcgttatcaacaagatggatgaaccaactgtgcaatgggataaggcaagatat
gatgacatagtgtctaagctcaatccgttcttgaagggatctgggttcagcttgaagact
gatgtaacttacattccagtgtctgcatactcaggagataacatcaaggataaagtttca
aaacctgaagcagagtggtgtgactcacctgctcttattccattcttggattcaatgcca
ttggttgatagaaattacagtgcaccattgatgatgccaattagtgaaaagtataaggat
atgggtacaatggttgttggtaaaattgaatctggtacactgaaatgtggagataagtta
acgcttatgccaaacaaagatcaagttgaagtgatgacaattgaagatgaactcgatgag
ccaattcaaatagcactatgtggtgacaatgttacactcaagttgagaggtgttgatgat
gagaatgtgcaagttggattcgtgttgacagatccaagaaaaccagtcaagacagtcaaa
caatttgaagctcaattggcaattcttgatcataagaatattatttgcgctggttactca
gctatgatgcactgtcacacattggcagaagaggtacatttatcagagttgttgcactac
tatgataagaagacgggcagaaaatcgaagaaggcaccacaattcgcaaagaaaggacag
aaagttgttgcattgttagaatcaactggctcagtttgtgtggagagtttcaacgattat
ccacaattgggtagattcacgttgagagatgaaggtaaaacggtagctattggtaagata
accaaattgattgagaagactgagagtggagagttggcggatgtttcaacaggtgttcaa
caattgtctgtaaataagtag

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