KEGG T04714: BWZ20

Winogradskyella sp. J14-2: BWZ20_05625

Entry

BWZ20_05625       CDS       T04714

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

wij Winogradskyella sp. J14-2

Brite

KEGG Orthology (KO) [BR:wij00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wij03032]
    BWZ20_05625
   03400 DNA repair and recombination proteins [BR:wij03400]
    BWZ20_05625
Enzymes [BR:wij01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BWZ20_05625
DNA replication proteins [BR:wij03032]
Prokaryotic type
  DNA Topoisomerases
   BWZ20_05625
DNA repair and recombination proteins [BR:wij03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BWZ20_05625

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim RP-C Toprim_4 MarR_2 Toprim_3

Other DBs

NCBI-ProteinID:

APY07805

UniProt:

A0A1P8RV71

Position

complement(1204884..1207391)

AA seq 835 aa
MSKNLVIVESPAKAKTIEKFLGKDYKVESSFGHISDLPSKELGVDVDGDFEPNYKVSKDK
RDVVKKLKALAKKAETVWLASDEDREGEAIAWHLAEALDLDKEKTKRIVFHEITKSAINK
AIENPRAIDYNLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQNFNAEASYRVDAEFTSEDGKSFKAKLPKNFGSEEEALEFLNNNKAATYQVADLQKKP
AKKSPAAPFTTSTLQQEASRKLGFSVSRTMSNAQRLYEAGLITYMRTDSVNLSDEARQGA
EKEITSAYGSEYSKPRNYKGKSKGAQEAHEAIRPTDFSNHSVNVERDQARLYDLIWKRAI
ASQMSEAKLERTNLKIQINSSNKVSEQFSANGEIITFDGFLKVYLEGTDDEDAEQDGILP
DLKVGEELANNYITATQRFTRPPSRFTEASLVKQLEELGIGRPSTYAPTISTIQNRNYIE
KGTHEGDERAYKQLVLSDQNIKEKELTEKVGSNKGKLVPTDVGFIVTDFLVNHFESILDY
NFTARVEESFDDIAEGKEDWKAMMKDFYKGFHPQVEDVRENAERETGERILGTDPKTGRQ
VSVRLGKFGPMVQIGTVDEEEKPQFASLLPDQQLNTITYEEAMDLFKLPKALGHYKDDEV
EVNVGRYGPYVRYGKKFVSLPQGVDPLSVELDEALVYIKEKEKADAPIYTYEGLEVTKGK
GRFGPFIKWNNMFINVNKKYDWDNLSEQDIVTLIEDKIQKEKDKLIHVWEEEGIRVEKAR
WGRHNVIKGKQKVELAKTVDVSDMTLEEAKAILEKNAPKKKTKKTTKKKTTTKKK

NT seq 2508 nt +upstreamnt +downstreamnt
atgtcgaagaatctagtcattgtcgagtcacctgcaaaggcaaaaacaatagagaaattt
ttaggaaaagattataaggttgagtcaagttttgggcatatttcagatttaccgtccaaa
gaactaggagtcgatgtagatggagattttgaaccgaactacaaggtctcaaaagacaag
cgcgatgttgtaaaaaaactaaaagccttagcaaaaaaagcagaaacagtttggctagca
agtgatgaagatcgagaaggagaagccatagcatggcatttggcagaagcactagattta
gataaggaaaaaacgaagcgtattgtttttcatgagattacaaaaagtgcaataaataaa
gctattgaaaaccctagagctattgattataacttagtagatgcgcagcaagcaaggcgt
gttttagaccgtattgtaggttacgagttgtcgccagttttatggcgaaaagttaaagga
ggtttatctgcaggtagagtacaatctgtatctgtaaggcttatcgttgagcgcgagcgc
gaaatacaaaactttaatgctgaagcatcctacagagtagatgcagagtttacatcagaa
gatggaaaatcatttaaagctaaattgcctaagaattttggttcagaagaagaggcttta
gaatttttaaataataataaagcagcgacttatcaagtagccgacctacaaaaaaaacca
gcaaaaaaatcaccagctgcaccttttacaacatctaccttgcagcaggaagcatccaga
aaattgggcttctcagtaagtagaaccatgagcaatgcacagcgtttatacgaagccggt
cttataacttatatgagaacagatagtgttaatctgtctgatgaggcaagacaaggcgct
gagaaagagattacatcggcttatggatctgaatatagcaaaccaagaaattacaaagga
aaatctaagggtgctcaagaggctcacgaagcaataaggccaacagatttttctaaccat
tcagtaaatgtagaacgtgatcaagcacgactttacgatttaatttggaaacgtgccatt
gcatcgcaaatgagtgaagctaaactagagcgcactaacttaaaaattcaaattaatagt
tctaataaagtaagtgagcaattctctgctaatggagaaatcataacctttgatggattt
ttaaaagtatacctagaaggtactgatgatgaagacgctgaacaagatggtattttgcca
gatttaaaagtaggcgaggaattagctaacaactatataacagcaacacaacgttttacc
agacctccttcaagatttacagaagcatctttggttaagcaattagaagaattaggtatt
ggtagaccatccacatacgcaccaacaatttctacaattcagaatagaaattacatagaa
aaagggactcacgaaggagatgaaagagcctacaaacaattagtcctttcagaccaaaat
attaaagaaaaggagcttacagaaaaagtaggttctaacaaaggtaaattagtgccaaca
gatgttggttttattgttactgactttttggtaaatcattttgaaagtattttagattac
aattttacagcaagagtagaagagagttttgatgacattgcagaaggtaaagaagactgg
aaagcaatgatgaaagatttttataaaggttttcatcctcaggttgaagatgttagggaa
aatgctgagcgcgaaacaggcgaacgtattcttggtacagatcccaaaacaggacgccaa
gtaagtgtgcgtttaggtaaatttggtcctatggttcaaataggtacagtagatgaagaa
gagaaaccacagtttgcaagcttattgccagatcagcagcttaataccattacctacgaa
gaggctatggatttatttaagcttccaaaggctttagggcactataaagacgatgaagtt
gaggttaatgtcggccgttatggtccatatgtaagatatggtaaaaagtttgtatcctta
cctcagggagtcgatccattaagtgtagaattagatgaagccctagtatatattaaagag
aaagaaaaggcagacgctcctatctacacgtatgaaggtttagaagttacaaaaggcaaa
gggcgttttggtccatttattaaatggaacaacatgtttataaatgtgaataaaaaatac
gattgggataatttatctgaacaagacattgtaactttgattgaggataaaatccaaaaa
gaaaaagataaacttattcatgtttgggaagaggaaggcattagagtagaaaaagcacgt
tggggaagacacaatgttataaaaggtaagcaaaaagtagaattagctaagaccgtagat
gtttctgatatgaccttagaagaggcaaaagctattctagagaaaaatgcgccaaaaaag
aaaaccaaaaaaaccacaaagaaaaaaacgaccactaaaaagaagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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