KEGG   Weissella koreensis: WKK_00905Help
Entry
WKK_00905         CDS       T01577                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
wko  Weissella koreensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:wko00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    WKK_00905
Enzymes [BR:wko01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     WKK_00905
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     WKK_00905
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(188997..189824)
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETVRRGLTNLVQGRTILKVEVRWEKIVGMSEAEFDAEMADRKIEKIDRRGKYL
LFRLSGNKTLVSHLRMEGAYYTVPAGTEPGKHDLITFHLDDEIDLFYRDTRKFGRMNLVD
TPNTMQVAGLAKIGPEPTEDDLTLEYMQKEFQRKGAIKPFLLDQSHIAGLGNIYVDETLW
MAKIHPLQPANTIDLEHLTHLRKAIIDELALATKNHGTTVHSFTTAFGEAGTFQNQLKVY
GRVGEPCYRCGTILVKTKVAQRGTTYCPHCQVLHD
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgccagagctaccagaagtagaaacagttcgacgaggattaacaaatcttgttcaaggt
cggacaattttaaaagttgaagtacgttgggaaaaaattgtcggtatgtcagaagcggaa
tttgatgcagaaatggctgatcgtaagatagaaaaaatagatcgtcgtggaaaatatttg
ttattcagattgagtggaaataaaacgttagtgtcgcatttacgcatggaaggggcgtat
tatacagttcccgctgggacagagccaggaaagcatgatttgatcaccttccatctggat
gatgagatcgatcttttttatcgggatactcgtaaatttggacggatgaatttagtcgat
acacctaatacaatgcaggtggccgggttggctaaaattggacctgagccaactgaagat
gatttgactttagagtacatgcaaaaagagtttcaaaggaaaggtgctattaaaccattt
ctattggatcaaagtcatatcgctgggttaggtaatatttatgttgatgaaacattatgg
atggcaaaaattcacccattacaaccagcaaatactattgatttagaacatctgacccat
ttacgcaaagctattattgatgaattagctttggccactaaaaatcatggaacaacagtt
cattcatttaccactgcttttggtgaggccgggacctttcaaaatcaattgaaggtttat
ggtcgagtaggagaaccttgttatcgatgtggaacgattcttgttaaaactaaggtagca
caacgtggaactacttattgcccacattgccaagtgttgcacgattaa

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