KEGG   Wolbachia endosymbiont of Culex quinquefasciatus Pel: WP0466
Entry
WP0466            CDS       T00719                                 
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
wpi  Wolbachia endosymbiont of Culex quinquefasciatus Pel
Pathway
wpi03030  DNA replication
wpi03410  Base excision repair
wpi03420  Nucleotide excision repair
wpi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:wpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WP0466 (ligA)
   03410 Base excision repair
    WP0466 (ligA)
   03420 Nucleotide excision repair
    WP0466 (ligA)
   03430 Mismatch repair
    WP0466 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wpi03032]
    WP0466 (ligA)
   03400 DNA repair and recombination proteins [BR:wpi03400]
    WP0466 (ligA)
Enzymes [BR:wpi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WP0466 (ligA)
DNA replication proteins [BR:wpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WP0466 (ligA)
DNA repair and recombination proteins [BR:wpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WP0466 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WP0466 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     WP0466 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WP0466 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT PTCB-BRCT DNA_ligase_ZBD HHH SHOCT
Other DBs
NCBI-ProteinID: CAQ54574
UniProt: B3CPS1
Position
complement(502720..504675)
AA seq 651 aa
MTDLEKMREKLQNQINYHNILYYQKSKPEISDAEYDELKKKLAAIEPEAYATQDSVGAPP
DERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIADEIEILCEPKIDGLSFSAIYED
GKFVKAATRGDGFVGEDVTHNVATIKGFPKFLQDVQGRLEVRGEIYISNSDFLKLNENNE
FANPRNAAAGSLKQLNANITAKRPLRYFAYSLIGGIEKSQSEVLEKLEKLGFCVNEHRSL
TSSLNGMLKFYNEIYDCRYNLDYDIDGIVYKVNDLVLQSRLGSTHKAPRSALAYKFSAIY
AKTKLNKIFIQVGRTGVLTPVADLVPVNIGGVLVSRASLHNQDEIKRKDIREGDVVTIKR
AGDVIPQIVKVDEGSRHTNMPEFVFPDICPECGSKVQIEGVAVRCPEEFNCKAQIVEKLK
HFVSKDAFDIVGLGEKQIKFFYDLELIRQIPDIFILEERLKEFSLKEHHGWGEKSIANLL
SAIQSRRVISLDRFIFSLGIRFIGQVVAELLANYYVSYDNWYNSMSSNDVELVGIDGIGE
KVAESLKSFFSQERNIKMLNDLTAYLQILPVSSNSSDSFLNNKIIVFTGKLRAMSRGEAK
VRAKVLGAKISSSLSTKTDYLIAGEDPGSKYKKAMELGVEILDEEQWNRLC
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgactgacttggaaaagatgagagaaaaactgcaaaatcaaattaattatcataatatc
ttatattatcaaaaaagtaagccagagataagtgatgctgaatatgatgaactgaaaaaa
aagttagctgcaatagagccagaagcttatgcaacacaagatagtgttggtgctccgcct
gatgagagattttctaaggtggaacatcaagaacctatgctttctcttgagaatgcttat
gatgaacaaggtgtagaaaaatttttgtctaaaataaagagatttttaattgcagatgaa
atagagatattatgtgagccaaaaattgatggattgtcattttctgcaatttatgaagat
gggaaatttgttaaagctgcaactcgaggtgacggttttgtaggagaggatgtaactcac
aatgttgcaacaataaaaggctttcctaagtttttacaagatgtgcaaggaagactagaa
gtaaggggtgaaatatatatcagtaacagcgactttttaaagttaaatgaaaataatgaa
ttcgctaatcctcgaaatgcagctgctggttctttaaagcaattgaatgcgaacattaca
gcaaaaaggcctcttagatattttgcttattctttaattggtggaatagagaaaagtcaa
agtgaagtactagaaaaacttgagaaacttggtttttgcgtaaatgagcatcgttcctta
acaagtagtttgaatggaatgctaaagttctataacgagatctatgattgtcgttataac
ttggattatgatatcgatgggatagtctataaagtgaatgatttggtgctacaaagtcgt
ctgggaagtacacacaaagcgccacgctcagcgcttgcatataagttttctgcgatttat
gcgaagacaaagttaaataaaatatttatacaggtgggtagaacgggggttttaactcca
gttgcagatttggtaccagttaatattggcggagtgctagttagcagagcaagtctacat
aaccaagatgagataaaacgtaaagatataagagaaggagatgttgtaacaattaaaaga
gctggagatgtaattcctcaaattgtcaaagtagatgaaggttctcgtcatacaaatatg
cctgaatttgtttttcctgacatatgtcctgaatgtggtagtaaagtgcagattgaagga
gtggcagtaagatgtcctgaagaatttaattgcaaggctcaaatagtagaaaaactaaaa
cattttgtgtcaaaagatgcatttgacattgttggccttggtgaaaaacaaataaagttt
ttttatgatctggaactaataagacaaattccagacatttttattttagaggaaagatta
aaagagttttccttaaaagagcatcatggttggggcgagaagtcaatagctaatctatta
agtgctatacaaagcagaagagtaatctctctagataggttcatattttctttgggtatc
agatttatcggccaagttgtagcagaattgctcgcaaattattatgtatcttatgataac
tggtataattcgatgtcatcaaatgatgttgagttggtaggtatagatggtataggagaa
aaagtagctgaatctttaaaatcgtttttttctcaggaacgtaacattaaaatgttaaat
gatcttactgcatatctgcaaattcttcccgtgagctccaactctagcgattcttttttg
aataacaaaattatagtgtttactggtaagctacgtgctatgagtagaggggaggcaaaa
gtaagagctaaagttttaggggcaaagatcagttcaagcctttctactaaaactgactat
ttaattgcaggagaagatccaggttcaaaatataaaaaagcaatggaattgggtgtggaa
attttagatgaagaacagtggaacagattgtgctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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