KEGG   Wolbachia endosymbiont of Culex quinquefasciatus Pel: WP0529
Entry
WP0529            CDS       T00719                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
wpi  Wolbachia endosymbiont of Culex quinquefasciatus Pel
Pathway
wpi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wpi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WP0529 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:wpi03021]
    WP0529 (rho)
   03019 Messenger RNA biogenesis [BR:wpi03019]
    WP0529 (rho)
Transcription machinery [BR:wpi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     WP0529 (rho)
Messenger RNA biogenesis [BR:wpi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     WP0529 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 Spore_III_AA OB_RNB AAA AAA_22 CutC NACHT
Other DBs
NCBI-ProteinID: CAQ54637
Position
568045..569451
AA seq 468 aa
MTTINEDVLAKGGVVGQPEKSEQIHNADAVKQMTSEGAEKNKKTLDLSELKEKTAEELLE
LAEERKISTSGKGNGRMLKQEMIFSLMKKMSEEGGITTGSGVVEILPDGFGFLRSSSANY
APSTDDVYISNGQIKKFNLRTGDMACGEIRPPGDKERYFTLTKVQSINSTEISELRKYVH
FDNLLPLYPEKSLILENNSSGDNKKDINMRAVDIVTPLGKGQRALIVAPPRTGKTILLQQ
MAHSIATNHPEIELIVLLIDERPEEVTDMIRSVKGEVVSSTFDEPAYRHVQLAEIVIEKA
KRMVEHKKDVVILLDSITRLARAYNAVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENG
GSLTIIATALIETGSKMDDVIFEEFKGTGNAEIILDRKLADKRIFPAIDITKSGTRKEEL
LVDKAILNKIWVLRRILNPMGSVEAMEFLRDKLLLTKSNADFFNSMNH
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgacaacaatcaatgaagatgtcttagcaaaaggaggggttgtaggtcaacctgaaaaa
agcgaacaaattcataatgctgacgcagtaaaacaaatgaccagtgaaggtgctgaaaaa
aacaagaaaacattggacctgagcgaattgaaagagaaaacagcagaagaattgttagag
ctagctgaagaaagaaaaatttcaactagtggtaaaggcaatggcaggatgctaaaacag
gaaatgatattcagtttaatgaagaaaatgagtgaagaaggaggcataaccacaggaagt
ggagtagtggaaatattgcctgatggttttggtttcttacgttcatcaagtgcaaattat
gctccaagtaccgatgatgtttatatttccaatggccaaataaagaagtttaatttacgt
acaggagatatggcatgtggagaaataaggccacctggtgataaagaaagatattttact
ttaactaaggttcaaagtataaactctactgaaatcagtgaattaagaaagtacgtccat
tttgataatttgcttccgctttatcctgaaaaaagcctcatccttgaaaacaacagtagc
ggagataataaaaaagatataaacatgcgtgctgtagatatagttacacctcttggaaaa
ggacaaagagcattgatagttgctccacctcgtacaggaaaaacgatattgcttcagcaa
atggctcactctatagctacaaatcatcctgaaatagaactaatagtattacttatagat
gaaagacccgaagaggtgacagatatgatacgctctgtaaagggtgaagtggtaagctct
acatttgatgaacctgcctaccgtcatgtccaacttgctgaaatagtaatagaaaaagct
aaaagaatggttgaacacaaaaaagatgtagtgattttgcttgattctataactcgtctt
gcacgtgcttataatgcagtcattccttcgtctggaaaggttctaaccggcggtgtagat
tcaaatgcgctgcaaagaccaaaacgcttttttggagcagctcgtaatattgaaaatggt
ggttctttgacaatcatcgctacagcccttatagaaactggttcaaaaatggatgatgtt
atttttgaagagtttaaaggcacaggtaatgctgaaattatactagatagaaaacttgct
gataaacgtatattccctgctattgatattacaaaatccggaacaaggaaggaagagcta
ttagttgataaggccatactaaataaaatatgggtattgcgtaggatacttaaccctatg
ggatctgttgaagcaatggagtttttacgtgacaaattacttttaacaaagagcaatgct
gacttttttaactccatgaatcactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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