KEGG X.axonopodis: XAC1199

Xanthomonas axonopodis: XAC1199

Entry

XAC1199 CDS X.axonopodis

Gene name dnaE2

Definition DNA polymerase III alpha chain

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway xac00230 Purine metabolism
xac00240 Pyrimidine metabolism
xac01100 Metabolic pathways
xac03030 DNA replication
xac03430 Mismatch repair
xac03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:xac00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:xac00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:xac03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:xac03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:xac03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti GspK

Other DBs NCBI-GI: 21241953
NCBI-GeneID: 1155270
UniProt: Q8PN74

Position 1365250..1368447

AA seq 1065 aa
MPRAWNVAARLRAANDDIVHAQQADGLPAYAELHCLSDFSFLRGASSAEQLFARAQQCGY
SALAITDECSLAGIVRGLEASRATGVRLIVGSEFTLVDGTRFVLLVENAHGYPQLCGLIT
TARRAASKGAYRLDRAEVQAQFRDVAPGVFALWLPGAQPQAEQGAWLQQVFGERAFLAVE
LHREQDDVARLHVLQALAQQLGMTALASGDVHMAQRRERIVQDTLTAIRHTLPLAECGAH
LFRNGERHLRTRRALGNIYPDALLQATVELAQRCTFDISKISYTYPRELVPEGHTPTSYL
RQLTEAGIRRRWPGGITAKVREDIEKELALIALKKYEAFFLTVQDVVRFAREQNILCQGR
GSSANSAVCYALGITAVNPDETRLLMARFLSEKRDEPPDIDVDFEHERREEVLQYVYSKY
GRERAALAATVICYRGKSAVRDVAKAFGLPPDQIALLANCYGWGNGETPMDQRIEEAGFD
LANPLINKILAVTEHLRDHPRHLSQHVGGFVISDEPLSLLVPVENAAMANRTIIQWDKDD
LETMKLLKVDCLALGMLTCIRKTLDLVRGHRGRNYSIATLPGGDAPTYKMIQRADTVGVF
QIESRAQMAMLPRLKPAAFYDLVIEVAIVRPGPIQGDMVHPYLRRRQGREEVNYPSPAVE
DILKPTLGVPLFQEQVMELLMHAADYSEDEADNLRRSMAAWRRGGDMEQHRTRVRERMQG
KGYASSFIDQIFEQIKGFGSYGFPQSHAASFAKLVYASCWLKRHEPAAFACGLLNAQPMG
FYSASQIVQDARRGSPERERVEVLPVDVLHSDWDNTLVGGRPWRSAADPGEQPAIRLGMR
QVAGLSQVVAQRIVAARTQRAFADIGDLCLRAALDEKARLALAEAGALQGMVGNRNAARW
AMAGVEARCPLLPGSPEERPVEFEAPRAGEEILADYRSVGLSLRQHPMALLRPQMRQRRI
LGLRELQGRRHGSGVHVAGLVTQRQRPATAKGTIFVTLEDEQGMINVIVWSHLALRRRRA
LLESRLLAVRGRWERVDGVEHLIAGDLYDLSNLLGDMQLPSRDFH

NT seq 3198 nt +upstreamnt +downstreamnt
atgccgcgcgcctggaatgtggctgcacgcctgcgcgcggccaatgacgatatcgtccac
gcgcagcaggccgatggtctgcctgcatatgccgaactgcattgtctgtcggacttttcg
ttcctgcgcggtgcctccagtgccgaacaattgttcgcacgcgcgcagcagtgcggctac
agcgccttggccattaccgacgaatgctcgctggccggcatcgtgcgtggcctggaagcg
tcgcgcgccaccggcgtgcgcttgattgtcggcagcgaattcaccctggtcgatggcacc
cgcttcgtgctgctggtggaaaacgcgcacggttacccgcagctgtgcgggttgatcacg
accgcacggcgtgcggccagcaagggcgcctatcgcttggatcgcgccgaggtgcaagcg
cagtttcgcgacgtggcgccgggcgtgtttgcgctgtggctgcccggcgcacagccgcag
gcagagcagggcgcctggttgcaacaggtcttcggcgagcgggcgtttctggcagtggaa
ctgcatcgcgaacaggacgatgtcgcgcgcctgcacgtcctgcaagcgctggcgcagcaa
ctgggcatgaccgcgttggccagcggcgatgtgcatatggcgcagcgtcgcgagcgcatc
gtgcaagacaccttgaccgccatccgccacacgctgccgctggccgagtgcggcgcacac
ctgttccgcaatggcgagcggcatctgcgcacccggcgcgcgttgggcaatatctacccg
gatgcgttgttgcaggccaccgtggagttggcgcagcgttgtaccttcgatatttccaag
atcagctatacctatcccagagagctggtgccggaaggccacacgcccaccagctatctg
cgccagctcaccgaagccggcatccgcaggcgctggccgggcggcatcacggcaaaggtg
cgcgaggacatcgaaaaagagctggcgctgatcgcactcaagaagtacgaagcgttcttc
ctcactgtgcaagatgtggtgcgcttcgcacgcgagcagaacattctctgccagggtcgt
ggctcatcggccaattcggcagtgtgttatgcgttgggcatcaccgcggtcaacccggat
gaaacgcgcctgttgatggcgcgcttcctgtccgaaaaacgcgacgagccgccggacatc
gacgtggacttcgagcacgaacgccgcgaggaggtgctgcaatacgtctacagcaagtac
gggcgcgaacgcgcagcgctggcggcgacggtgatctgctatcgcggcaagagcgcggtg
cgcgacgtggccaaggccttcggcctgccaccggaccagatcgcgttgctggccaattgc
tacggttggggcaatggcgaaacgccgatggaccagcgcatcgaagaagccgggttcgat
ctggccaacccgctgatcaacaagatcctggccgttacagagcatttgcgcgatcaccca
cggcatctgtcgcagcatgtcggcggcttcgtcatctccgacgagcccttgtcgctgctg
gtgccggtggaaaatgccgcgatggccaaccgcaccatcatccagtgggacaaggacgat
ctggaaaccatgaagctgctcaaggtcgattgcctggcgctgggcatgctcacctgcatc
cgcaagacgctggatctggtgcgcggccaccgtgggcgcaattacagcattgccacgctg
ccaggcggtgacgcgccaacctacaagatgatccagcgcgccgacaccgtcggcgtgttc
cagatcgagtcgcgtgcgcagatggcgatgctgccaaggctcaagcctgcggcgttctac
gacctggtcatcgaagtggcgatcgtgcgccccgggccgatccagggcgacatggtgcac
ccctatctgcgcaggcggcagggccgcgaagaagtgaactacccgtcgcctgcggttgaa
gacatcctcaagcccacgctgggcgtgccgttgtttcaggagcaggtgatggaactgctg
atgcatgctgccgattacagcgaggacgaagccgacaacttgcgtcgctcgatggccgca
tggcggcgcggcggcgacatggaacagcatcgcacgcgcgtacgcgaacgcatgcagggc
aaaggctacgcctccagcttcatcgaccagatcttcgaacagatcaagggtttcggttcc
tacggttttccacagagccatgccgcctcgttcgccaagctcgtctatgccagctgctgg
ctcaaacgccacgaaccggccgcattcgcctgcgggctgctcaacgcgcagccgatgggc
ttttattcggccagccagatcgtgcaggatgcgcgccgcggcagccccgagcgcgagcgt
gtggaggtgctgccggtggatgtgttgcacagcgactgggacaataccctggtcggcggc
cggccgtggcgcagcgctgccgatcccggcgaacaaccggcgatccggctgggcatgcgg
caggtcgccggactgtcgcaagtggtggcgcagcgcatcgttgccgcacgcacgcagcgg
gcgttcgccgatatcggcgatctgtgcctgcgcgccgcactcgacgaaaaagcacgcctg
gcattggcagaagcaggcgccttgcaaggcatggtgggcaaccgcaatgccgcgcgctgg
gcaatggccggcgtggaggcgcgctgcccactgttgccgggcagcccggaggagcgcccg
gtggagttcgaggcgccgcgcgcgggcgaagaaatccttgccgattaccgctcggtcggc
ctgagcctgcgccagcatccaatggcgctgctgcgcccgcagatgcgccagcggcgcatc
ctgggtctgcgcgaattgcagggccgccgccacggcagcggcgtgcatgtggccggcctg
gtcacccagcgccagcgcccggccaccgccaagggcaccatcttcgtcaccctggaagac
gaacagggcatgatcaacgtcatcgtctggtcgcaccttgcgctgcgtcgccgccgcgcg
ctgctggaatcgcgcctgctggccgtgcgcggtcgctgggaacgcgtggacggcgtagag
catctcatcgccggcgacctgtacgacctcagcaacctgctcggcgacatgcagctgccc
tcgcgcgatttccattga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)

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