KEGG T00084: XAC4335

Xanthomonas axonopodis pv. citri 306: XAC4335

Entry

XAC4335 CDS T00084

Gene name

recD

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

xac Xanthomonas axonopodis pv. citri 306

Pathway

xac03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:xac03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD AAA_22 UvrD-helicase T2SE AAA_28 AAA_16 Herpes_Helicase DUF2075 UvrD_C AAA_17 KaiC AAA_18 AAA_29 NTPase_1 Rad17

Other DBs

NCBI-GI:

21245047

NCBI-GeneID:

1158406

UniProt:

Q8PEL4

Position

complement(5123886..5125943)

AA seq 685 aa
MSLLADLQAKSHLRTLDHAFAQSLRRLRPDTPDTVLLAAALASLAVANGHAGLDPRRPRL
LVDADVAWPAADAWMAQLQASPWIAQPDDPLAAAASDAPLVLEHGLLYLRRYREYEARLA
AGLTRIASDTLPATESAVLAAVFAALFPSATTGQDRQAQAAALALRRALLLITGGPGTGK
TTTIARLLLLRLAQAHAAGQPPPRIALAAPTGRAAERMAESLRIALARAIEQGLPAEHQG
ASPLPPAGEGARRAGEGTAPTDFSWHSALPTGASTLHRLLGVIPDSPHFRHDADNPLPFD
LIVVDEASMVDLPLMCKLVDAVADGTQLILLGDADQLPSVEAGDVLAAILRAAGPGDTLP
PDDARALQPLLGNAPVTAPAASTPVGHLAGHRVHLLRGYRQAADFALAPLADAVRIGDAE
TALSLLRSGTLPGVHFHEDGDDPLSLGREALLAHWQALTATNDPADALRQAGRLRLLTAV
RAGPQGARGLNARIEQLLAESGSGARRLGAASPWFHGRLLLITENSYRHGLFNGDVGICL
RSEASPASVRDPQAALVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDEVWL
QLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRSALARHAARISGLAWRLGAEQMQP
TADAASPLRATTPTALGNPIQGSLF

NT seq 2058 nt +upstreamnt +downstreamnt
atgagcctgctcgccgatctgcaggccaagagccatctgcgcacgctcgaccacgcgttc
gcgcagagcctgcgtcggttgcgtccggacacgcccgataccgtgctgctggccgctgcg
ctggcctcgctggccgtggccaatggccatgccggcctcgatccccgccgcccacggctg
ctggtcgatgcagacgtcgcctggccggcggccgacgcctggatggcccaactgcaggcc
tcgccgtggatcgcccaacccgacgatccgctggctgctgcggccagcgacgcacccctc
gtccttgagcacggcctgctctacttacgccgctatcgcgaatacgaagcccgcctggcc
gccgggttgacccgcatcgcgtcagacacgttgccagcgaccgagagtgctgtcctcgct
gcggtgtttgctgcgctgtttcccagcgcgaccaccggccaggatcgccaggcccaggcc
gccgcgctggcgctgcgccgcgccctgctgctgattaccggcggccccggcaccggcaag
accaccaccatcgcccgtctgctgctgctgcgtctcgcccaggctcatgccgccggccaa
ccgcccccccgcatcgcgctggccgcgcccaccggccgcgctgccgagcgcatggccgaa
agcctgcgcatcgcgctggcgcgcgcgatcgagcagggcttgcccgcagaacatcaaggc
gcgtcccctctcccgcctgcgggagagggtgcccgcagggcgggtgagggcaccgctcct
accgacttctcctggcacagcgccctgcccaccggcgccagcaccttgcatcgcctgctg
ggcgtgattccggattccccgcacttccgccacgacgccgacaacccgctgccgttcgac
ctgatcgtcgtcgacgaagcgtccatggtcgacctgccgctgatgtgcaagctggtcgat
gcggtggccgatggcacccaattgatcctgcttggcgatgccgaccaactgccctcggtg
gaagccggcgacgtactcgccgccatcctgcgggccgccggtcccggcgacacgctgccg
ccggacgatgcgcgcgcgctgcaacccttgttgggcaacgcgccggtgaccgccccagcc
gccagcacacccgtcggtcacctcgccggccaccgcgtgcacttactacgcggctaccgc
caggccgccgacttcgccctggcgccgctggccgatgccgttcgcattggcgatgccgag
accgcactgtcgctactgcgcagcggcacgctgccaggcgtgcacttccacgaagacggc
gatgacccattgagcctgggccgtgaggccttgctcgctcactggcaggcgctgaccgcg
accaacgatccggccgatgccctgcgccaggccggccgcctgcgcttgctcaccgcggtg
cgcgccggcccgcaaggcgcgcgcggcctcaacgcccgtatcgaacaactgttggccgaa
agtggctccggtgcccgccgcctcggtgcggcctcgccctggtttcacggccgcctgctg
ctgatcaccgaaaacagctatcgccatggcctgtttaacggtgacgtcggcatctgtctg
cgcagcgaagccagtcccgcctcggtgcgcgacccgcaagccgccctggtcgcctggttc
gaaggcgacggcgacggccaggtgcgcggcttccaccccgccgcactgcccgcacacgaa
agcgccttcgccatgaccgtgcacaaggcccaaggcagcgaattcgacgaggtctggctg
caactgcccacccgcgatgcccgcgtactcagccgcgaactgctctacaccggcatcacc
cgcgcccgccgcgccctgcacctggccggcagcgaagcggtcatccgtagcgcactggca
cgccacgccgcacgcatctcgggattggcatggcggctgggtgcggagcagatgcaaccc
actgcggatgctgcatcacctttgcgagcaacaacgccaaccgcattgggcaatcccatc
cagggctctctattctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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