KEGG   Xanthomonas albilineans: XALC_1111
Entry
XALC_1111         CDS       T01160                                 
Symbol
dbpA
Name
(GenBank) probable atp-independent rna helicase protein
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
xal  Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:xal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xal03009]
    XALC_1111 (dbpA)
Enzymes [BR:xal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     XALC_1111 (dbpA)
Ribosome biogenesis [BR:xal03009]
 Prokaryotic type
  rRNA helicases
   XALC_1111 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_22 AAA_19
Other DBs
NCBI-ProteinID: CBA15626
UniProt: D2UD76
Position
complement(1305010..1306386)
AA seq 458 aa
MTDFDILSLSPALAPGIDALGYTTMTPVQAQSLPPILAGHDVIVQAPTGSGKTAAFGLGL
LHKLDPALVRAQALVLCPTRELADQVGKQVRKLATGIANMKLVVLTGGMPLAPQLASLEA
HDPQVVVGTPGRIQELARKRVLHLGGVRTLVLDEADRMLDMGFEEPIREIAGRCDKHRQS
LLFSATFPETIRALARELLKDPTEITVAGAESAPEIDQQFFEVDPSYRQKAVAGLLLRFA
PESSVVFCNTRKEVDEVASSLQQFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLAAVLNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRELQRAQALETEQ
SLPLRWSRAPLATARPAQLPQAAMVTLRIDGGKTDKLRPGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAQASKALAKLQAGKIKGRRFRVSPL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaccgatttcgacatcttgtccctctcccctgcgttggcacccggcatcgacgcactg
ggctacaccacgatgacgcccgtgcaggcgcagagcctgccaccgatcctcgccggccac
gacgtcatcgtgcaggcgcccaccgggagcggcaagaccgccgccttcggcctgggtctg
ttgcacaaactggatccagccctggtccgcgcacaggcgctggtgctgtgcccgacccgc
gaactggccgaccaggtcggcaagcaggtgcgcaagctggccaccggcattgccaacatg
aaactggtggtgctgaccggcggcatgccgttggcgccgcaactggcctcgttggaggca
cacgatccgcaagtggtggtgggcacgcccggccgcatccaggaactggcacgcaaacgt
gtcttgcacctgggtggagtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaggagccgatccgcgagatcgctggccgctgcgacaaacaccgccagagc
ctgctgttctctgccacgttccccgagacgatccgcgcgctggcacgcgaactgctgaag
gatccgacggagatcaccgtcgctggcgccgagagcgcaccggagatcgaccagcagttc
ttcgaggtcgaccccagctaccgacagaaggccgtggccggcctgctgctgcgcttcgcg
ccagagtccagcgtggtgttctgcaatacccgcaaggaagtcgacgaggtggccagttcg
ctgcagcagttcggcttctcggcgttggcgctgcatggcgacatggaacagcgtgatcgc
gacgaggtgttggtgcgcttcgtcaaccgcagttgcaatgtgctggtcgccagcgacgtc
gccgcgcgcgggctggacgtggaggatctggccgccgtgctcaactacgaactgccgacc
gacaccgagacctatcgccatcgcatcggccgcaccgctcgcgccggcaagcatggcttg
gccctgagtctggtggcgccgcgcgaactacagcgcgcgcaggccctggaaaccgaacag
agcctgccgctgcgctggtcgcgcgcaccactggccaccgcgcgcccggcacagttgcca
caagcagcgatggtcacgctgcgcatcgatggcggcaagaccgacaaactgcgtccaggc
gacatcctcggcgcattgaccggcgaggccggcctgtccggcgcggccatcggcaaaatc
gcgatctaccctacccgctcctacgtcgccatcgcccgcgcccaggccagcaaggcgctg
gcgaaactgcaagcgggcaagatcaaaggccgccgcttccgggtgagtccgctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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