KEGG   Xanthomonas axonopodis Xac29-1: XAC29_21615Help
Entry
XAC29_21615       CDS       T02500                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
xao  Xanthomonas axonopodis Xac29-1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:xao00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    XAC29_21615
Enzymes [BR:xao01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     XAC29_21615
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     XAC29_21615
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5044302..5045117)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL
LIDTDAGGSVLLHLGMSGSLRVLPGDTLPRAHDHVDISLQSGRLLRFNDPRRFGCLLWQS
GTQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGVGNIYAAESLHR
AGISPLREAGKVSLERYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELFVYG
REGEACKQCGRVLKHATIGQRATVWCGSCQR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgcccgaggtcgaaacgacgttgcgtggcctgtcgccgcatctggttggg
cagcggatccatggcgtgatcctgcgtcggcccgatctgcgttggccgattcccgagcag
atcgagcgcttgcttcccggcgccaccattaccaacgtgcgccgacgtgcgaaatacttg
ctgatcgatacggatgccggcggcagcgtgctgttgcatctggggatgtccggaagtctg
cgggtgctgcctggcgacacgttgccgcgggcgcacgaccatgtggatatcagtctgcaa
agcgggcgcttgctgcgtttcaacgatccgcgtcgctttggctgcctgttgtggcaatcc
ggcacacaagcccatgacttgctcgctgcgcttggtccagaaccattatcggatgcattt
actggcgattatctccacgcgctggcacaggggcggcgcgctgccgtcaagacctttttg
atggatcaggccgtggttgtcggagttggaaatatctacgctgccgaaagcctgcatcgg
gcgggaatcagtccgttgcgcgaggcggggaaggtctcgctggagcgttatcggcgtctg
gctgatgcagtgaaagacatcctggcgtatgccatccagcgcggtggaaccacattgcgc
gacttcatcagccccgatggtgcgcccggctatttcgagcaggaactttttgtttatggg
cgcgagggcgaggcctgcaaacagtgtggacgggtcttgaaacacgcgacgatcggtcaa
cgcgctacggtgtggtgcgggagctgtcagcgataa

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